Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2940 ATGGTTTCTGATTCAATCACTACCGCTCCTATTCCTTCAGCTGCAAACGCGAAGAATTTGAGCAAGAAAAAAAGGACCAACAGGTCTGCTAAATTAAAGCAATGTAAGATTGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGTTATGGTCAAGACTAAGAATTGCAAGGACCTAGGGGACGGTGGACATGCGCCCTCCATGCCTGTTGGGGAAGCCAGCAAACGTTCATGGGAGAAATTGGAGATGATCCCTAGAGGTGAGGAGATTGATGAATCGATCCATCATGATGGCTACATGGAATCTCTATCCAATAGTCCCTCCAGTGTTGATAGTAGCATGTTGGGGGGTAATGAGTCTGGAACAAATTTCACTGGAAGCAGCAGCAGCAGTGCCGGGACCTGCTCTGGGAATGTCACTGAAGAAGAAGGCGATGATGATTGCTTGGATGATTGGGAGGCTGTGGCTGATGCATTAGCCGCCAATGACAAGCATCAAAATGCATGCTCGGAGTCACCCCCTGCTCATGAATCAGTTGTGCAAATGGTTTCGCCTCGTGAAATGACTCATGGGTCGTATTTAGGTGCACGGAATTCTAAAACCGAGAGTGATAGACTAGTTCCGTTGGCCTCTGGCAATAGCCGAGCTTGGAGGCCTGATGATGCTTTTCGTCCTCAGAGTCTTCCTAATCTTTCTAAGCAGTATAGTTTGCCAAATCCGGACTCTCGTGGAGGAGGGATCCCATCGGCTCACCCTGCTGCACCATCGCCTTGTCCAATATGCTGTGAGGATCTTGACTTGACAGATTCGTCTTTTTTACCTTGCTTGTGTGGATTTCGGCTTTGCCTCTTCTGTCACAAGAGGATTCTTGAGCAGGATGGTCGCTGTCCTGGGTGCAGGAAGCCTTATGATTGCAAATCTGTTGAGCCAGAGGCAAGCGTCCATGGAGGCAACCTGACTCTTCGTTTGGAGCGCTCACGTAGCATGATTTATAGGACATAA 999 0.4865 MVSDSITTAPIPSAANAKNLSKKKRTNRSAKLKQCKIDARREQWLSQVMVKTKNCKDLGDGGHAPSMPVGEASKRSWEKLEMIPRGEEIDESIHHDGYMESLSNSPSSVDSSMLGGNESGTNFTGSSSSSAGTCSGNVTEEEGDDDCLDDWEAVADALAANDKHQNACSESPPAHESVVQMVSPREMTHGSYLGARNSKTESDRLVPLASGNSRAWRPDDAFRPQSLPNLSKQYSLPNPDSRGGGIPSAHPAAPSPCPICCEDLDLTDSSFLPCLCGFRLCLFCHKRILEQDGRCPGCRKPYDCKSVEPEASVHGGNLTLRLERSRSMIYRT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2940 332 ProSiteProfiles Zinc finger RING-type profile. 257 299 IPR001841 -
Prci4g2940 332 MobiDBLite consensus disorder prediction 1 15 - -
Prci4g2940 332 SUPERFAMILY RING/U-box 255 309 - -
Prci4g2940 332 MobiDBLite consensus disorder prediction 98 137 - -
Prci4g2940 332 MobiDBLite consensus disorder prediction 1 32 - -
Prci4g2940 332 MobiDBLite consensus disorder prediction 193 207 - -
Prci4g2940 332 CDD mRING-HC-C4C4_CNOT4 257 300 IPR039515 -
Prci4g2940 332 MobiDBLite consensus disorder prediction 190 249 - -
Prci4g2940 332 Pfam RING/Ubox like zinc-binding domain 257 303 - -
Prci4g2940 332 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 253 321 IPR039780 GO:0004842|GO:0030014
Prci4g2940 332 FunFam RING/U-box superfamily protein 250 315 - -
Prci4g2940 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 314 IPR013083 -
Prci4g2940 332 MobiDBLite consensus disorder prediction 98 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2940 Prci-Chr4 41157488 41159092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2940 - - gmx:100792365 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2940 4 41157488 41159092 Prci4g2940 4 41157488 41159092 ECH