Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2921 ATGGTTTGTCGTAATTATTTGAGTTGGGCTGTACTATGCCTTTTGGTGCTTTCACTCCTCTCTGACTCGTCCTCTGAGCCACAATCTCGTTGGGCCACCAAGAAAAAACGCATGAGAGAGAAAGCTCGCGAGATGTTTTACCATGCGTATGACAACTACATGACTCATGCATTCCCGCATGATGAGCTAAAGCCTCTAACCAAAACATTCACGAACTCCCTTAGTGAGCTAGGAAATTTGAAGCTTGAACACTTGTCTCAAGACTACAATGGATCAGCCCTGACGCTTATTGAATCATTGTCTAGCCTGGTTATTATGGGCAACAACACTGAATTCAAGAGGGCAGTGCTCTGGCTTTCTGAAAACCTAACATTTGATGTTGATGCACGAATAAATCTTTTTGAGTGCAACATTAGAGTTCTTGGAGGACTTGTCTCTGCTCATCTTCTTGCATCTGATTCTGCAAATAATTTGTTTCAAGCAGCCTACAAAAATCAGCTGCTAGTACTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTAATACACCCACGGGATTGCCATATGCATGGATCAACTTAAAGTACGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCTTTAATTCTTGAAATGGGTGCTTTATCAAAATTGACTGGTGATCCCATATATGAATCAGTGGCTTTACGAGCTATACGCAAGCTATGGAGCATGCGGAGTTCATTAAATTTATTTGGAACTACTCTTGATGTGGAAACTGGGGAATGGATAGAGTTTTCATCGGGAATTGGAGCAGGGGTTGATTCATTCTACGAGTATCTTCTTAAAGCCCATATCCTTTTTGGGAAGGAAGACTTCTGGAGAATGTTTCACTCTGCTTATGTTGCTGTTCAGAAATATTTCAGACATGGTCCTTGGTACCATGAAGCGGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACAAGCCTTCAAGCTTTTTGGCCTGGACTACAGGTTCTTATTGGGGATATTACAGCTGCTAATTCAACGCATCGCGAGTTCTACCATGTGTGGGAGAAATTTGGAGTGCTTCCGGAGAGGTATTTACTGGATCATCAGATGCTGCATCCTACTGAAAAATATTATCCATTGCGCCCTGAATTTGCAGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCGTGGTATATTGAAGTGGGGGAATCAATAATTAATTCCCTCAACACGTACACCAAAGTTGAAGGAGGGTTTGCAAGCATCAGGGATGTGAAAACAATGGAGCTGGAAGATCATCAACATAGTTTTTTCCTTGCTGAAACGTGCAAATATTTATATCTTCTATTTGATGATTCATTTTTAAAAGATGGCAATTACATATTTACCACTGAAGGCCATCCCCTTCCAGTTCCAAGTGTTTGGCAAGAAAGGCTCCCGGAAACCTACGTTCCTACAAATTGGACTTACATGAAGAGTGAACAAGCATACAAAATAAGTGCAATGTCAATGCAAGTATGTCCCGCAGTGACTCTAAGCTCAGGGAAACATGTTGAGAGTGGATGCCATGTACCTGACGCTCGCAGTGACCACAGGTGTTTCGCTGATGAAGATTGTGGAGTTGATTCCACTTCATGTAGAAGAAGATCTTGCAGTATGGCTGGTTATTGTGGGTTATGGCTCTCCATTTGA 1716 0.4184 MVCRNYLSWAVLCLLVLSLLSDSSSEPQSRWATKKKRMREKAREMFYHAYDNYMTHAFPHDELKPLTKTFTNSLSELGNLKLEHLSQDYNGSALTLIESLSSLVIMGNNTEFKRAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSANNLFQAAYKNQLLVLAEDLGNRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPIYESVALRAIRKLWSMRSSLNLFGTTLDVETGEWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFHSAYVAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDITAANSTHREFYHVWEKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIINSLNTYTKVEGGFASIRDVKTMELEDHQHSFFLAETCKYLYLLFDDSFLKDGNYIFTTEGHPLPVPSVWQERLPETYVPTNWTYMKSEQAYKISAMSMQVCPAVTLSSGKHVESGCHVPDARSDHRCFADEDCGVDSTSCRRRSCSMAGYCGLWLSI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2921 571 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 9 503 IPR044674 GO:0004571|GO:1904380|GO:1904382
Prci4g2921 571 Gene3D - 28 488 IPR012341 GO:0005975
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 45 65 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 271 288 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 130 148 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 180 199 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 328 344 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 444 464 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 PRINTS Glycosyl hydrolase family 47 signature 385 409 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 Pfam Glycosyl hydrolase family 47 45 478 IPR001382 GO:0004571|GO:0005509|GO:0016020
Prci4g2921 571 SUPERFAMILY Seven-hairpin glycosidases 36 491 IPR036026 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2921 Prci-Chr4 41011640 41017110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2921 1 568 Glycoside Hydrolase AT1G27520 74.042 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2921 K10084 - gmx:100793674 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2921 4 41011640 41017110 Prci4g2921 4 41011640 41017110 ECH