Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2901 ATGGGGGACAACAAGCGAAAGAGAGGACGCAAGCCCAAAAATCCTGCTACAGAAATCCTAGACTTGCCTACCACTGGCACTGCCCCTAACAACAACAGCAACAACCCTTCCACTAAGGATGATGTCTTCTCTGTTGGCAATGTTGATCGAATTGACAACACTACCTCTCCACGCTACCGTCGCCGACCAAAGAAATCAGCCAATCACTTTGACAAGCTTGATAAGGCACCTGTAATTTCTACTGCTAGACGGGTTTCCCGTTCTGTTGACATTGATGGAGATTTTACTGTTCCTGGTGATACAGGGGGCTCTATGGCAGTAGCAATGGCCATGGAAGCAGATCCTGCATGGGAGAGTGTTTCGGCAAGAGTGGTGCCAGCAATGGACTCCGTTGTTAAGGTGTTCTGTGTGCACACAGAACCTAATTTTTCATTGCCGTGGCAGAGGAAAAGGCAGTACAGCTCTAGCAGTAGTGGGTTTGTGATAAGTGGGAGGAGGGTGCTCACCAATGCCCATTCAGTGGAGCACTACACCCAAGTCAAGCTCAAGAAACGTGGCTCCGATACCAAATACTTGGCCAGAGTGCTTGCCATTGGGACTGAATGTGACATTGCCATGCTTACTGTTGAAGATGATGAATTCTGGCAAGGAATGTCACCTGTAGAGTTCGGTTGTTTGCCCACACTGCAAGATGCGGTTATTGTTGTTGGTTACCCTATTGGCGGAGACACCATTTCAGTGACTAGTGGTGTTGTATCTCGCATTGAGATTCTATCATACGTCCATGGTTCTGCTGAACTTCTAGGATTACAGATAGATGCTGCTATAAACTCGGGTAATTCTGGTGGGCCTGCGTTTAATAATAAAGGAAGTTGTGTGGGAATTGCATTTCAGTCCCTCAAACATGAAGATGCAGAAAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCGTGATTACGAGAAGAATGGTGCATATACAGGATTCCCTGTCCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAATGGCAATGGGCATGAGATCTGATCAGAAGGGGGTACGTATCAGAAGAATTGATCCAACTGCTCCAGAATTTAATGTTTTGAAACCGTCAGATGTTATTCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGGACAGTTCCATTTCGCCATGGAGAGCGCATTGGTTTCAGTTATCTTATATCTCAGAAATACACTGGGGATAAAGCAGTAATCAAAGTATTGCGAGATTCAGAGATATCGAAATTTAACATTAAACTTGGTAGTCACAAAAGGCTCATTCCGGCACATAGCAAGGGCAAGCCTCCCTCATATTATATCATTGCCGGATTTGTTTTTACAACTGTCTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATACGAGGCTCCAGTCAAGCTTTTGGATAAACTGCTGCATTCAATGCCACAGTCACCAAATGAGCAACTTGTTGTGGTCTCTCAGGTGCTGGTAGCTGATATAAACATTGGGTATGAAGATATTGTTAATACTCAGGTCCTCGCTTTTAATGGAAAACCTGTTAAAAACCTGAAGAGCTTGGCCACCATGGTTGAGAACTGCAATGATGAATATCTAAAATTCGATCTAGAGTATGATCAGATAGTGGTCCTTCGCTCAGCTACTGCTAAAGCAGCTACTCTTGATATTCTAACTACGCACTGCATTCCATCAGCCATGTCGGATGATCTCAAGGGATGA 1776 0.4426 MGDNKRKRGRKPKNPATEILDLPTTGTAPNNNSNNPSTKDDVFSVGNVDRIDNTTSPRYRRRPKKSANHFDKLDKAPVISTARRVSRSVDIDGDFTVPGDTGGSMAVAMAMEADPAWESVSARVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYLARVLAIGTECDIAMLTVEDDEFWQGMSPVEFGCLPTLQDAVIVVGYPIGGDTISVTSGVVSRIEILSYVHGSAELLGLQIDAAINSGNSGGPAFNNKGSCVGIAFQSLKHEDAENIGYVIPTPVIMHFIRDYEKNGAYTGFPVLGVEWQKMENPDLRMAMGMRSDQKGVRIRRIDPTAPEFNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDKAVIKVLRDSEISKFNIKLGSHKRLIPAHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPNEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLATMVENCNDEYLKFDLEYDQIVVLRSATAKAATLDILTTHCIPSAMSDDLKG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2901 591 MobiDBLite consensus disorder prediction 1 69 - -
Prci4g2901 591 MobiDBLite consensus disorder prediction 20 53 - -
Prci4g2901 591 CDD PDZ_serine_protease 334 428 - -
Prci4g2901 591 Pfam PDZ domain 334 436 IPR001478 GO:0005515
Prci4g2901 591 Gene3D - 336 441 IPR036034 GO:0005515
Prci4g2901 591 Gene3D - 106 214 IPR043504 -
Prci4g2901 591 PANTHER - 74 589 - -
Prci4g2901 591 Gene3D - 442 591 IPR046449 -
Prci4g2901 591 SUPERFAMILY Trypsin-like serine proteases 126 328 IPR009003 -
Prci4g2901 591 SUPERFAMILY PDZ domain-like 359 441 IPR036034 GO:0005515
Prci4g2901 591 Pfam PDZ domain 443 588 IPR041517 -
Prci4g2901 591 Pfam Trypsin-like peptidase domain 158 295 - -
Prci4g2901 591 Gene3D - 227 335 IPR043504 -
Prci4g2901 591 FunFam Protease Do-like 9 107 214 - -
Prci4g2901 591 FunFam protease Do-like 9 216 326 - -
Prci4g2901 591 PRINTS HtrA/DegQ protease family signature 266 283 IPR001940 GO:0004252|GO:0006508
Prci4g2901 591 PRINTS HtrA/DegQ protease family signature 159 171 IPR001940 GO:0004252|GO:0006508
Prci4g2901 591 PRINTS HtrA/DegQ protease family signature 229 253 IPR001940 GO:0004252|GO:0006508
Prci4g2901 591 PRINTS HtrA/DegQ protease family signature 375 387 IPR001940 GO:0004252|GO:0006508
Prci4g2901 591 PRINTS HtrA/DegQ protease family signature 187 207 IPR001940 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2901 Prci-Chr4 40872753 40879301 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2901 K25897 - gmx:100817187 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2901 4 40872753 40879301 Prci4g2901 4 40872753 40879301 ECH