Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2828 ATGTTACATTTTCAGGATTCAAATTCAAGACTCGTGCTTCTCGTTAAAAGTTTGGATACAACTCCTTTGCTACACTGGTTGGACCAAGAGTTTTGTGATTCTAACCTAATTATATCATTCAATATCTTTCATTTTTTGAACCCAAGAAAATTCAGATCATTCTTAAGAAGGCGATTAATTGAAGGCTTGAAGCCTGCAAAGCGCAAATTTGCAGAGACCAATCCATACAGAATGTCATCGGCGACAAGGGATCACGGGATTTTTAGCCGGATGGCGAGCCTTCCTAGAAGTATTATGGGGGAGTTTTCGAGGGCCATGAGTGATATAGGATCAGTAAGAAGAAGAAGAAGAAGAGGATCAAGATCTCAAAACGAACTCGCTCCTTCCTCTTCAGATTTCCAATTCCAGCCGTTGGATGCCCCGGTAGTTCGGGAGAACCAGTGGGCTTTTCTGGAAAGCTTTGAGCATCAATACGGCACCGTACATCCTTTCTTCTACGCGTGCCGTTTAATGGAAGTTCTGAAACTCGCAGAGCAAGACAAGAAGTTGGTGTTCATGTACATCCATTCGCCAGAACACCCTTTCACGCACAATTTCTGTAGGGAAACACTGTGTTGTGAGCTTGTGACTGAGTTTCTTGACGTGAATTTTGCTTGCTGGGGAGGTCTTGCTGATCGGGGCGAAGGTCTGCGTATGGTGGCCACTCTCCGCCCTGCTAGCTTTCCCCTCTGCGCCGTCGTCGCCCCTGCCGCCGGTGACACCATGGCAGTTCTGCAACAGATTGAAGGACCAGTTTCAGCAGCGGAGCTTGTGGAGGTTTTACAGAGAACAATGGAAGAGCAAGGACTGGCCTTTGGAAGTGACAAAGCTCGGCGGGAAGAAAAGATCAGAGCTGATCGTCGGCTGAGAGAAGAACAAGATGCTGCATATTTCGCAGCTTTGCAAATTGACAAGGAAAAAGAAAACCTCAGGAATTCAACTTCGGGAGAAAGAGTTCAGAAACCAGTGGAAGCATTGAATACCAGAAATCATGAGAACCTCAAGAACAAGCCTGTCAGTAGCAACAACTCCAAAGTGAATGAATCTACAATCACTACAAAGCATCAAAACAAAGGAGTTCCTAAACGGGGAGGTCACTCTCAACCCATTCAAATATTGATAAGGTTTCCAAATGGGGAAAGACGTGAGCAGAGTTTTGAGTGTACGGACAAAGTCCAGTCAATTTTCGCGTACATTGATTCGCTGGGTTTGCCTGGGATTGGGAACTACAGATTGGTGTCAAACTTCCCAAGAAGAATGTACGGCGTAGATGAAATGAGAATGACTCTCAAAGATGCCGGCTTCCATCCCAAAGCGAGCCTCTTCCTCGAGCCCATATCCGCCGACCCATAG 1392 0.4612 MLHFQDSNSRLVLLVKSLDTTPLLHWLDQEFCDSNLIISFNIFHFLNPRKFRSFLRRRLIEGLKPAKRKFAETNPYRMSSATRDHGIFSRMASLPRSIMGEFSRAMSDIGSVRRRRRRGSRSQNELAPSSSDFQFQPLDAPVVRENQWAFLESFEHQYGTVHPFFYACRLMEVLKLAEQDKKLVFMYIHSPEHPFTHNFCRETLCCELVTEFLDVNFACWGGLADRGEGLRMVATLRPASFPLCAVVAPAAGDTMAVLQQIEGPVSAAELVEVLQRTMEEQGLAFGSDKARREEKIRADRRLREEQDAAYFAALQIDKEKENLRNSTSGERVQKPVEALNTRNHENLKNKPVSSNNSKVNESTITTKHQNKGVPKRGGHSQPIQILIRFPNGERREQSFECTDKVQSIFAYIDSLGLPGIGNYRLVSNFPRRMYGVDEMRMTLKDAGFHPKASLFLEPISADP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2828 463 MobiDBLite consensus disorder prediction 346 379 - -
Prci4g2828 463 Gene3D - 377 458 - -
Prci4g2828 463 SUPERFAMILY Ubiquitin-like 376 459 IPR029071 -
Prci4g2828 463 ProSiteProfiles UBX domain profile. 385 456 IPR001012 GO:0005515
Prci4g2828 463 SMART 45neu3 149 275 IPR006577 -
Prci4g2828 463 SUPERFAMILY Thioredoxin-like 145 283 IPR036249 -
Prci4g2828 463 MobiDBLite consensus disorder prediction 110 133 - -
Prci4g2828 463 PANTHER FAS-ASSOCIATED PROTEIN 79 457 - -
Prci4g2828 463 Pfam UBX domain 380 457 IPR001012 GO:0005515
Prci4g2828 463 SMART ubx_3 378 458 IPR001012 GO:0005515
Prci4g2828 463 MobiDBLite consensus disorder prediction 346 370 - -
Prci4g2828 463 CDD UAS 170 280 - -
Prci4g2828 463 Gene3D Glutaredoxin 139 283 - -
Prci4g2828 463 CDD UBX 385 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2828 Prci-Chr4 40338739 40340730 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2828 K18726 - gmx:100775212 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2828 4 40338739 40340730 Prci4g2828 4 40338739 40340730 ECH