Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2800 ATGTCAAGTTCCAATCTTCCTTCTGTTTTAACATATCTTATGATTATCGTATGTACAGTCTGGACTTCTCTTTGGGTTCTGAAGCCTACGCAATTGTGGACAAAAAGATGGAAAGATGCCGAAGATAGTGCCAATAAAACTGTGTTTGGCTACTATGGTTTGAACTATGCTGCGTATACATTTCCTATAATTGCCGTCACTATAATAGGACTTGTTTTCTTGGATTTAAAGTCTGGAGAACGAAGAAGCAGTAAAGCAAGGAGTCTGTACACTGTCCTCTCAAGTCCACTTGTGGTGAATAGTCTTCTGGGAATCCTATCCAGTATTGAGATACTGCTAGTTTTTCTTTTCATCCTCTTCTTAACATGGACCTTTTATGCTCGCATCTCTAACGACTTCAAGAAGCTGGTACCTGATAAATCACTGAAGCTGGACTTATGGGAACTCAAGTATCTCAGAGTAGCAACCAGATTTGGCTTGCTAGCAGAAGCCTCCCTGGCTTTGCTTCTTCTTCCTGTCTTAAGGGGTTTAGCCCTGTTTCGAATACTTGGCATTCAATTTGAAGCTTCAGTGAGATATCATACCTGGGTTGGAACAGCAATGATATTTTTCGCTGCAATCCATGGAGGAAGCACTTTGCTCATCTGGGCTGTCAGCAGCCACATACAAAACGAGACATGGAAGTGGCAGAAGACAGGACGAATATACCTCGCTGGGGAGATTGCACTTGTTACGGGGCTAGTTATCTTGTTCACTTCACTTCCTCGAGTTAGAAGGAGAAAGTTTGAAATCTTCTACTACACCCATCATCTGTACTCAGTATTTCTTGTATTTTTCTTGTTTCATGCTGGAGATAGGCACTTTTACATGATCTTCCCAGGAGTAGTTCTTTTTGGTCTTGACAAAATCCTTCGTATCATACAATCAAGGCCAGGAACTTGCATCGTTTCAGCCCGAGTTTTCCCTTGCAAAGCTGTGGAGCTCATTCTCCCCAAAGATCCAAGACTAAACTATGCTCCCACAAGTGTGATATTTATGAAGATACCAACCATATCAAATCTCCAATGGCACTCCTTCAGTATAACATCTAGTTCCACTGCCGATGAACGAAAGATGTCCATGATAATTAAATGTGAAGGATGGTGGACGAGTTCGCTTTTTAACATGATACATGCTGAGCTGGGCAGAGATTCTGATAAGATGAAGGGTATACCTGTTGCAATTGAAGGACCTTACGGACCTGCGTCTCTGGACTTCTTGAAATATGACAGTCTACTTCTGGTTGCTGGAGGGAGTGGAATAACCCCATTTCTGAGTATTTTGGCAGAAGCTTCCTCAGCCACCAGCACTAGTAGATTCCCCTCAAGGATACAACTTGTGTATGTCATCAAGAAGGCACAAGACTTCTCTCTGTTGCATTCAATCTCCCACCTGTTGCTCAACGAGTCGCCTGGAAAGTGTTATTTGAAGCTAAAACTATTTGTAACTCGAGAAAAACAGTCAGGCGTGACAGTTAGAGACCTGCTGAATGAATTCTATGAAGTAAAAACTTTGCACTTGAGCAGAGAGTGTTCGAATTATGCAGTACACGGGCCAGATAGTCCAACTTGGACGGCTGCCATTTTAGGATTTTGCTCCACCATTTTTCTTATTGTTCTTATTTGTCTCAACCATATAATTCCACCTGAGAAGGGATCCGAAAAGTCCAAAGACAAGACTCCCTCTTGGGTTGTGGATATGCTTCTTATGGCTTCTTTTGTCATAGCTTTAGCTTGCAGCACCTTGATGGGAATCTTTTTGAGGTGGAGAAGGCTGCAGAAAGGGATTCCACCAACCTCCCAGAAAGAATTTAAGCCCCTCGATTTAATTTCTACTGAAACCAGGAGTACCTTTGAAGAACATGAAGTCCATTTTGGGGGACGACCAAACTTTCAAGATATATTTAGGGAGTTTGAAAATGAAAGTGGGGGAACAAATACTGGCGTGTTGGTATGTGGACCAGAGAGCATGAAGGAGTCGGTGGCCATGATTTGCCAACAGAAATCCAAGTGTTTCAAGTTAGGTTCCAAGAAAAGCGAAGCCTTTACTTTGCACTCCCTCAACTTTACACTCTAG 2115 0.4246 MSSSNLPSVLTYLMIIVCTVWTSLWVLKPTQLWTKRWKDAEDSANKTVFGYYGLNYAAYTFPIIAVTIIGLVFLDLKSGERRSSKARSLYTVLSSPLVVNSLLGILSSIEILLVFLFILFLTWTFYARISNDFKKLVPDKSLKLDLWELKYLRVATRFGLLAEASLALLLLPVLRGLALFRILGIQFEASVRYHTWVGTAMIFFAAIHGGSTLLIWAVSSHIQNETWKWQKTGRIYLAGEIALVTGLVILFTSLPRVRRRKFEIFYYTHHLYSVFLVFFLFHAGDRHFYMIFPGVVLFGLDKILRIIQSRPGTCIVSARVFPCKAVELILPKDPRLNYAPTSVIFMKIPTISNLQWHSFSITSSSTADERKMSMIIKCEGWWTSSLFNMIHAELGRDSDKMKGIPVAIEGPYGPASLDFLKYDSLLLVAGGSGITPFLSILAEASSATSTSRFPSRIQLVYVIKKAQDFSLLHSISHLLLNESPGKCYLKLKLFVTREKQSGVTVRDLLNEFYEVKTLHLSRECSNYAVHGPDSPTWTAAILGFCSTIFLIVLICLNHIIPPEKGSEKSKDKTPSWVVDMLLMASFVIALACSTLMGIFLRWRRLQKGIPPTSQKEFKPLDLISTETRSTFEEHEVHFGGRPNFQDIFREFENESGGTNTGVLVCGPESMKESVAMICQQKSKCFKLGSKKSEAFTLHSLNFTL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2800 704 PANTHER NADPH OXIDASE 36 702 - -
Prci4g2800 704 Pfam FAD-binding domain 316 416 IPR013112 GO:0016491
Prci4g2800 704 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 299 418 IPR017927 GO:0016491
Prci4g2800 704 SFLD Ferric reductase subgroup (FRE) 10 696 - -
Prci4g2800 704 CDD NOX_Duox_like_FAD_NADP 315 469 - -
Prci4g2800 704 SFLD Ferric Reductase Domain 30 697 - -
Prci4g2800 704 SUPERFAMILY Riboflavin synthase domain-like 314 414 IPR017938 -
Prci4g2800 704 Pfam Ferric reductase like transmembrane component 159 279 IPR013130 -
Prci4g2800 704 Pfam Ferric reductase NAD binding domain 422 679 IPR013121 GO:0016491
Prci4g2800 704 FunFam ferric reduction oxidase 8, mitochondrial 406 541 - -
Prci4g2800 704 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 406 519 IPR039261 -
Prci4g2800 704 Gene3D - 601 702 IPR039261 -
Prci4g2800 704 Gene3D - 406 541 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2800 Prci-Chr4 40077724 40081197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2800 179 704 Miscellaneous Gene Families AT5G50160 48.468 6.67e-178 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2800 K00521 - gmx:100816560 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2800 4 40077724 40081197 Prci4g2800 4 40077724 40081197 ECH