Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2721 ATGGCACTTTACCTTCTCCACGAATCCGCTTCTGGCTACGCCCTGTTCCATGCTCATGGCCTTGATGAAATTGGGCAGAACACTGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTAGTGCAGCTTGCGGCATTTTCTCCTTTCCAATCTGCTCTTGATGCTCTTAAGCAATGCAACTCTGTTTCTGAAGGCCTGTTGACTGATGAGCTGAGAAGTTTTCTGGAGATTAATCTCCCAAAAGTTAAGGAAGGCAAGAAGGTGAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGCTCTCAGATCTCTGAAGTATCTAAAATTCCATGTCAAAGTAACGAGTTTGTGGGTGAGTTGCTTCGAGGCGTCCGACTTCATTTTGATAGATTTCTCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCCAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAACTGGTAAAGATCATAAATGACAATTATCTTTATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAAGCTGTCTGAGGACAAAATCTCAGGCTTAACAGACATAGTTGGAGATGAAGACAAGGCAAAGGAGATTGTGGAAGCTGCCAAGGCGTCTATGGGACAGGATTTGTCTCCAGTGGACCTAATTAATGTCCAGCAATTTGCTCAGAGGGTAATGGACCTATCTGAGTATAGGAGGAAGCTTTATGATTATCTTGTTACCAAGATGAATGATATTGCTCCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGCGCACGATTGATTTCACATGCTGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATATGGTCTAATATTCCATTCATCTTTCATTGGTCGAGCATCTGCCAAGAACAAAGGCCGGATGGCTCGCTATCTTGCTAACAAATGTTCAATTGCATCACGCATTGACTGCTTTTCTGAAAGGGGTAGTACAGCTTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTCTATGACAAGGGAGTTGCCCCTCGTAAGAACGTTGATGTCATGAAGGCTGCTATTGAAAATGCTCAAAATAAAGACACTGAGATGGCAACAGAAGCGCCTATCGAAGTATCTGGCAAGAAAGGCAAAAAGAAGCCAAAAGCTGCTGATGGAGTTGAAGACATGGCTGTCGATAAGTCCAACGGAGTTACAAATGGTGATGCATTAGAGGATCGCAAATCAGAAAAGAAAAAGAAGAAAGAAAAGAGGAAACTGGACATGGAAACAGAGATGCAAGATGTGGCCGTTCAAGATGATGCCAACGGGGCTGATGCCAAGGCAAATGGAGAAGCTAATAAGAAGAAGAAGAAGAAGAAGAAAGAGCAGAAAGATAATGATGGAGAAGTACAGGAAGCCGCTGTTAAGACCAAGAAGAAGAAGTCCAAAAATGAGGATGATGAGTAA 1671 0.4279 MALYLLHESASGYALFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKVKFSLGVVDPKIGSQISEVSKIPCQSNEFVGELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIINDNYLYARVAKYIEDKSKLSEDKISGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSERGSTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKAAIENAQNKDTEMATEAPIEVSGKKGKKKPKAADGVEDMAVDKSNGVTNGDALEDRKSEKKKKKEKRKLDMETEMQDVAVQDDANGADAKANGEANKKKKKKKKEQKDNDGEVQEAAVKTKKKKSKNEDDE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2721 556 FunFam Nucleolar protein 56 140 298 - -
Prci4g2721 556 Gene3D - 141 298 - -
Prci4g2721 556 SUPERFAMILY Nop domain 163 412 IPR036070 -
Prci4g2721 556 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 552 IPR045056 GO:0030515|GO:0031428|GO:0032040
Prci4g2721 556 Gene3D Nop domain 299 422 IPR042239 -
Prci4g2721 556 MobiDBLite consensus disorder prediction 446 463 - -
Prci4g2721 556 SMART NOSIC_2 170 222 IPR012976 -
Prci4g2721 556 MobiDBLite consensus disorder prediction 530 556 - -
Prci4g2721 556 FunFam Nucleolar protein 56 299 411 - -
Prci4g2721 556 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Prci4g2721 556 MobiDBLite consensus disorder prediction 474 500 - -
Prci4g2721 556 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Prci4g2721 556 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Prci4g2721 556 MobiDBLite consensus disorder prediction 434 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2721 Prci-Chr4 39355846 39359531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2721 K14564 - gmx:100779446 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2721 4 39355846 39359531 Prci4g2721 4 39355846 39359531 ECH