Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2686 ATGGCGGCTACCGGAGAGAGTCCACGAAGCCCAGAAGCGAAGCTGGGGATGCGAGTGGAGGATCTGTGGGACGTTCAGGAGCCACAGCTAAGTCCCACCGAGAAGCTTAACGCTTGCTTCGAAAGCATCCCAGTGTCTGCTTTCCCTTCAGCTCCTTCAAGTCAAGTGGTGGAGATAAAATCAGACGCCACCCTACCGGAAGCTGTAGAAATACTAGCACACCACAATATTCTGAGCGCACCGGTGGTGGATGTTAAAGCACCTGAAGGTGCTACTTGGATTGACAGATATATCGGAATAGTTGAGTTTGCAGGAATTGTTGTATGGGTCTTGCAACAGTCTGAGCCTCTATCTCCCAAGAGTCCAACCAGTGGAGGTGCTAATGTAGATGCAGCTAATGGTTTCAGTTATCCTCTAGAACTTGGAGGCTTAGGATTTGGATCTGCAGCAACAACTTCTGGCAACTATTTTGAGGATCTAACTTCTTCTGAATTTTATAAGAATACCAAGGTTTGTGATATTTCAGGATCATTCCGCTGGGCACCATTTCTTGCATTGCAAAGATCAAACTCATTTCTGACCATGCTCTTGCTACTTTCGAAGTATAATATGAAGAGTATTCCTGTGGTGGATCCGGGTGCAGAAACTATTGATAATGTTATTACACAGTCTGGTGTTATTCATATGTTGGCGGAGTGCGTGGGGCTTCAGTGGTTCGAGAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCGTGATGACACCTGATTGCATCATCAAGGTTTATGAGGATGAACCAGTGCTTCAGGCGTTTAGATTGATGAGGAAAAAGAGGATTGGAGGGTTACCTGTGATAGAAAGGGGCAGCAACAAGGCTGTGGGTAACATAAGCCTACAAGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCACGATTATAGAGCTATTACAGTAGAAGACTTTCTGACAGCAGTTAGAAGCTATTTAGAGAAGCACAAAGAGGCCTTCCCAATGTTGAGCGCCTTGGTTACATGCCAAAAGGATTGCACTGTCAAAGAATTGATTCAATTGCTTGACCATGAGAAGATTCACCGGATATATGTTGTGAGTGATGATGGTGATCTAGAAGGAGTGATCACACTCAGAGATATCATCTCAAGGCTAGTGGACGAGCCCAAAGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCTCTGCCTCCAGACAGCCGGGTTTAA 1248 0.4511 MAATGESPRSPEAKLGMRVEDLWDVQEPQLSPTEKLNACFESIPVSAFPSAPSSQVVEIKSDATLPEAVEILAHHNILSAPVVDVKAPEGATWIDRYIGIVEFAGIVVWVLQQSEPLSPKSPTSGGANVDAANGFSYPLELGGLGFGSAATTSGNYFEDLTSSEFYKNTKVCDISGSFRWAPFLALQRSNSFLTMLLLLSKYNMKSIPVVDPGAETIDNVITQSGVIHMLAECVGLQWFESWGTKKLSEVGLPVMTPDCIIKVYEDEPVLQAFRLMRKKRIGGLPVIERGSNKAVGNISLQDVQFLLTAPEIYHDYRAITVEDFLTAVRSYLEKHKEAFPMLSALVTCQKDCTVKELIQLLDHEKIHRIYVVSDDGDLEGVITLRDIISRLVDEPKGYFGDFFDGVLPLPPDSRV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2686 415 ProSiteProfiles CBS domain profile. 255 316 IPR000644 -
Prci4g2686 415 Pfam CBS domain 52 101 IPR000644 -
Prci4g2686 415 Pfam CBS domain 254 303 IPR000644 -
Prci4g2686 415 Pfam CBS domain 341 392 IPR000644 -
Prci4g2686 415 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Prci4g2686 415 SUPERFAMILY CBS-domain pair 28 231 IPR046342 -
Prci4g2686 415 ProSiteProfiles CBS domain profile. 341 397 IPR000644 -
Prci4g2686 415 CDD CBS_pair_SF 260 388 - -
Prci4g2686 415 Gene3D - 244 394 IPR046342 -
Prci4g2686 415 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 391 - -
Prci4g2686 415 SUPERFAMILY CBS-domain pair 219 401 IPR046342 -
Prci4g2686 415 CDD CBS_pair_SF 196 303 - -
Prci4g2686 415 SMART cbs_1 259 308 IPR000644 -
Prci4g2686 415 SMART cbs_1 182 231 IPR000644 -
Prci4g2686 415 SMART cbs_1 344 392 IPR000644 -
Prci4g2686 415 SMART cbs_1 55 111 IPR000644 -
Prci4g2686 415 Gene3D - 39 237 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2686 Prci-Chr4 39157671 39160488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2686 - - gmx:100780629 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2686 4 39157671 39160488 Prci4g2686 4 39157671 39160488 ECH