Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2582 ATGGGAACAGACAACGAGATGGTCGGAGCTTCATCAGATCTTCATAATCGTGAATCGGATATAGAGCTCATTGGAGGTGAGAGGGCATCTAATAGTGGTCCATTAAGTGGACCTTTGAACAAAAGGGTTGGGAGGAAGAGTACGCAGTTCAGTGTTCCTGAATCCAGCGCCGACATTATTGTTGGTAGCAGCAGTGGCAACAAACCAGAGGATGGAGACGACGGAGCCTATGTTGAGGTCACAATGGATATACAAGGAGACTCTGTTGCTTTACACAGCGTTAAGACTGTTGCCGGTGGGGATCTCCGTGAAGATGAGAGATCTGGTTTGCTTGGAAAAGGCCTTGAGAAGAAAACATCCTTTGGTGCTTCACTTGTGCGTAATGCTTCTATCAAAGTCAAGCATGTTTCTCAGGAGCTGAAGCGTTTGGCTTCGTTTTCAAAGTCATCAGCACCAATGAAACACTATGATAGGACTAAATCTGCAGCTGCTCATGCTCTCAAGGGACTCAAGTTCATCAGTAAAACTGATGGAGGTGCAGGATGGGATGAGGTTGAGAAGCAGTTTGACAAGCTTACTGCAACCACAGATGGCTATCTTACTCGTGATCTCTTTGGAAAATGTATAGGAATGAACAAGGAATCTGAGGCTTTTGCACTGGAGCTGTTTGATGCTCTCGCTCGGAAGAGAGGTATCCTGGGGGATTCCATTAACAAGGCGCATCTGAGGGATTTTTTGGACCAGATTTCCGACCAAAGCTTCGACTCTAGGCTTAGAACATTCTTTGACATGGTGGATAAAGATGCAGATGGCAGAATAACTGAGGAAGAAATCAAAGAGATTATCTGCCTTAGCGCCACTACCAACAAACTCGCAAATATCCAGAAACAAGCAGAGGAATATGCAGCTTTGATCATGGAAGAACTAGACCCAGATAACACAGGATTTATCATGATAGACAACCTGGAGGTGCTATTGTTGCATGGACCTGAAAATTCTAAAAGGGGAGACAGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTGAAGCCTACCTATGACAACAATGTTATAAGGCGGTGGTACAGGGACACCACATACTTCTTACAGGATAATTGGCAGAGAGCTTGGGTATTGACACTGTGGTTAGGTGTGATGGCAGGTCTATTTGCCTACAAGTACGTGCAGTATCGAGAAAGAGATGACGTGTATGATGTAATGGGCCATTGTGTGTGCATGGCGAAAGGTGCAGCTGAGACGCTAAAATTGAACATGGCTCTTATTTTGTTACCTGTTTGCCGAAACACCATCACCTGGATCAGGAATAGGACCAGGCTAGGTGTTGTGGTTCCTTTTGATGACAACCTCAACTTCCACAAGGTGATAGCTGTAGGAGTAACATTTGGCGTTGGTATACATGGTATTTATCATCTTGCTTGTGATTTTCCTCGCCTTCTTCGTGCAAGTAATGAAAAGTACAAGTTTATGGTGCAATATTTCGGACCCAAACCTTCTAGTTATTGGCATTTTGTCAAATCATGGGAAGGAGTGACAGGGATTATAATGGTTGTGCTAATGGCAATAGCATTCACCCTGGCCACCCCTTGGTTCAGGAGAGGCAGGGTGAAGCTACCCAGACCCTTTGACAAGCTAACCGGTTTCAATGCCTTTTGGTATTCCCATCACCTCTTCATCATTGTGTATGCTATGTTGATAGTGCATGGAGAGAAACTTTACTTGACCAAGAAATGGTACAAGAAAACGACCTGGATGTATTTGGCTATTCCTGTCATCATTTATGTATTAGAAAGATTGATTAGAGCTCTCAGATCGAGCATCAAGCCTGTGAGAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCAATTCACATGTCAAAGCCTCATGGATTTAGATACAGAAGTGGACAATTTATGTTTGTCAATTGTGCTGCTGTATCTCCGTTTGAATGGCATCCATTCTCCATAACCTCAGCACCTGGTGATGACTACCTTAGCGTTCATATTCGAACAGCAGGTGACTGGACCCGGAGCCTAAAAGCAAAATTCTCAGAGGCGTGCCGGCCTCCGCCAAATGGTATGAGTGGACTGTTAAGAGCTGAATGCATGCAAGGAGATAGCAATCCAAGCTCTCTTCCCAAAGTTCTGATTGATGGTCCATATGGAGCGCCAGCTCAAGACTATCAAAAGTATGAGGTAGTTTTGCTAGTGGGATTGGGAATAGGGGCAACCCCAATGATCAGTATAGTGAAGGACATAGTAAATAACTACAAGGCCATGGAAGAAGAGGAGGAGATGGCGTTAGAGGAAGGAGCAAGTGGTAAATCACAAAAATCCCAAGAAAGAAAAGCTGGACACAGTGGGTTTAAAACCAGGAAGGCATACTTCTACTGGGTGACTAGAGAACAGGGTTCTTTTGACTGGTTCAAAGGGGTAATGAACGAGACGGCTGAAGCAGACCACCGTGGAGTGATTGAGCTCCACAATTACTGCACTAGTGTCTATGAAGAGGGTGACGCACGCTCTGCTCTTATCGCTATGCTGCAGTCTCTAAATCACGCAAGGAATGGCGTCGACATTGTCTCTGGCACTCACGTCATGACTCACTTTGCCAAACCCAATTGGCGCAGTGTCTACAAGCGCATCGCGCTTGCTCATCCACAAGCCCGGGTTGGGGTGTTTTACTGTGGGATCCAGGCGCTCACAACAGAGCTTCGCCAATTAGCTTCGGATTTCTCTCACAAGACAAGCACGAAATTCGACTTCCATAAAGAAAATTTCTGA 2808 0.4512 MGTDNEMVGASSDLHNRESDIELIGGERASNSGPLSGPLNKRVGRKSTQFSVPESSADIIVGSSSGNKPEDGDDGAYVEVTMDIQGDSVALHSVKTVAGGDLREDERSGLLGKGLEKKTSFGASLVRNASIKVKHVSQELKRLASFSKSSAPMKHYDRTKSAAAHALKGLKFISKTDGGAGWDEVEKQFDKLTATTDGYLTRDLFGKCIGMNKESEAFALELFDALARKRGILGDSINKAHLRDFLDQISDQSFDSRLRTFFDMVDKDADGRITEEEIKEIICLSATTNKLANIQKQAEEYAALIMEELDPDNTGFIMIDNLEVLLLHGPENSKRGDSKYLSQMLSQKLKPTYDNNVIRRWYRDTTYFLQDNWQRAWVLTLWLGVMAGLFAYKYVQYRERDDVYDVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWIRNRTRLGVVVPFDDNLNFHKVIAVGVTFGVGIHGIYHLACDFPRLLRASNEKYKFMVQYFGPKPSSYWHFVKSWEGVTGIIMVVLMAIAFTLATPWFRRGRVKLPRPFDKLTGFNAFWYSHHLFIIVYAMLIVHGEKLYLTKKWYKKTTWMYLAIPVIIYVLERLIRALRSSIKPVRILKVAVYPGNVLAIHMSKPHGFRYRSGQFMFVNCAAVSPFEWHPFSITSAPGDDYLSVHIRTAGDWTRSLKAKFSEACRPPPNGMSGLLRAECMQGDSNPSSLPKVLIDGPYGAPAQDYQKYEVVLLVGLGIGATPMISIVKDIVNNYKAMEEEEEMALEEGASGKSQKSQERKAGHSGFKTRKAYFYWVTREQGSFDWFKGVMNETAEADHRGVIELHNYCTSVYEEGDARSALIAMLQSLNHARNGVDIVSGTHVMTHFAKPNWRSVYKRIALAHPQARVGVFYCGIQALTTELRQLASDFSHKTSTKFDFHKENF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2582 935 CDD NOX_Duox_like_FAD_NADP 618 877 - -
Prci4g2582 935 FunFam Respiratory burst oxidase homolog A 156 274 - -
Prci4g2582 935 SFLD NADPH oxidase subgroup (NOX) 144 935 - -
Prci4g2582 935 Gene3D - 730 935 IPR039261 -
Prci4g2582 935 FunFam Respiratory burst oxidase homolog A 602 694 - -
Prci4g2582 935 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Prci4g2582 935 Pfam Ferric reductase NAD binding domain 739 917 IPR013121 GO:0016491
Prci4g2582 935 SFLD Ferric reductase subgroup (FRE) 356 935 - -
Prci4g2582 935 PRINTS Cytochrome B-245 heavy chain signature 721 734 IPR000778 GO:0016020|GO:0016491
Prci4g2582 935 PRINTS Cytochrome B-245 heavy chain signature 744 761 IPR000778 GO:0016020|GO:0016491
Prci4g2582 935 PRINTS Cytochrome B-245 heavy chain signature 517 540 IPR000778 GO:0016020|GO:0016491
Prci4g2582 935 Pfam FAD-binding domain 615 732 IPR013112 GO:0016491
Prci4g2582 935 SUPERFAMILY EF-hand 182 329 IPR011992 -
Prci4g2582 935 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 611 735 IPR017927 GO:0016491
Prci4g2582 935 FunFam Respiratory burst oxidase protein A 730 935 - -
Prci4g2582 935 MobiDBLite consensus disorder prediction 24 72 - -
Prci4g2582 935 Coils Coil 758 778 - -
Prci4g2582 935 Gene3D - 156 274 - -
Prci4g2582 935 ProSitePatterns EF-hand calcium-binding domain. 266 278 IPR018247 -
Prci4g2582 935 Pfam Respiratory burst NADPH oxidase 156 256 IPR013623 GO:0004601|GO:0050664
Prci4g2582 935 Pfam Ferric reductase like transmembrane component 416 572 IPR013130 -
Prci4g2582 935 SUPERFAMILY Riboflavin synthase domain-like 615 732 IPR017938 -
Prci4g2582 935 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 737 935 IPR039261 -
Prci4g2582 935 Coils Coil 284 304 - -
Prci4g2582 935 Gene3D Translation factors 603 694 - -
Prci4g2582 935 MobiDBLite consensus disorder prediction 33 63 - -
Prci4g2582 935 PANTHER NADPH OXIDASE 217 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2582 Prci-Chr4 38150539 38156071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2582 29 935 Miscellaneous Gene Families AT5G51060 64.355 0.0 1203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2582 K13447 - gmx:100800248 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2582 4 38150539 38156071 Prci4g2582 4 38150539 38156071 ECH