Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2417 ATGATGTCACAAGTGTTCATGCTAGAGCCTATGTGTCTGGCCTCGAGAAGGCTATGGGTCAAGCTTCAGAGAAAGGCCTTATTTTCATTGATGGCTCTGGACCAACATATGCTACAGCCACTTCGAAGATGCATCTATCCTGCTTGGAGTACTGTGACGTTTTCATCTGTTTGCTCTCTGATGGTAGTGCTAATAATGCAGACATTCCAGGAGTCATTAGTTGCTGCTGGAGCCGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCGTCAGAGAACAGCCTAGATCCACCCACTGGTTTTGCTTTGATAAGACCACCTGGACATCATGCTGTTCCACAAGGGCCTATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCTGCTCGTTATGCTCAACGTGTACATGGACTAAAGCGTGTATTTATAATTGATTTCGATGTCCACCATGGGAATGGAACGAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTCTCAACTCACCAAGATGGAAGCTATCCTGGCACTGGTAAGTTTGATGAGGTGGGAGCTGGAGATGGAGAAGGAACCACATTAAACCTGCCTCTTCCAGGAGGATCAGGTGATACTACTATGCGAACTGTGTTTGATGAAGTCATTGTGCCCTCTGCTCAGAGGTTTAAGCCAGACATCATTCTTGTTTCTGCCGGGTATGATGCTCATGTGTTGGATCCACTAGCCAATCTGCAGTACACAACAGGAACATACTACATGCTTGCATCCAATATAAAACAATTAGCAAAAGAATTATGCGGAGGCCGCTGTGTGTTTTTCTTGGAGGGAGGATATAATCTCAAATCTCTTTCACATTCAGTGGCAGACTCATTCCGTGCCTTTCTCGGTGATCGGAGTTTGGCATCTGAGTTTGATGACCCAAAGATTCTCTATGAAGAGCCATCAACAAGGGTTAAGCAAGCAATCGATAGGATAAAAGCCATACATTCCCTGTGA 993 0.4491 MMSQVFMLEPMCLASRRLWVKLQRKALFSLMALDQHMLQPLRRCIYPAWSTVTFSSVCSLMVVLIMQTFQESLVAAGAGLALVDSVVAASENSLDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTTMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLANLQYTTGTYYMLASNIKQLAKELCGGRCVFFLEGGYNLKSLSHSVADSFRAFLGDRSLASEFDDPKILYEEPSTRVKQAIDRIKAIHSL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2417 330 SUPERFAMILY Arginase/deacetylase 63 297 IPR023696 -
Prci4g2417 330 Pfam Histone deacetylase domain 63 291 IPR023801 -
Prci4g2417 330 CDD HDAC_classII 67 294 - -
Prci4g2417 330 Gene3D Histone deacetylase domain 51 329 IPR037138 -
Prci4g2417 330 PRINTS Histone deacetylase superfamily signature 105 128 IPR000286 -
Prci4g2417 330 PRINTS Histone deacetylase superfamily signature 223 233 IPR000286 -
Prci4g2417 330 PRINTS Histone deacetylase superfamily signature 139 154 IPR000286 -
Prci4g2417 330 PANTHER HISTONE DEACETYLASE 9-RELATED 67 329 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2417 Prci-Chr4 36900140 36903856 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2417 - - pcin:129309348 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2417 4 36900140 36903856 Prci4g2417 4 36900140 36903856 ECH