Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2382 ATGAGAGCCACGATGGGTCATTCGACGCATGCCGTTGAAGCTAGACACCGTTTACCTACTTCCATTGAAGACTTGAAACGAAGATTGCCGAGAAATAAGACGAAAGATGTGGAGAAGCCATTCCATTTAACAAGCCAAGATAAGAGCTCAAGATGCAAGTTTTCTCTCTTAAAACTCATCTTATTACTAACCATTTCTGGCACTTTTGTGACACTTATCTACGCTCCAGAAGTTTATAACACTAACCACTTATCAAGCTCAGGTTCTGGGTGGATATGGGGTGGCTCAGATAATCGGTATATATCGAATGAGGACATTGATTGGAATGATATATTGGCAGTTTCAATGAAGGTGACAGCGAAAAATGAACTGCAAGGGGTTGGTCTTCTGAACTTCAACAACACTGAAGTAGAGAAATGGGAGAAACTTATGCCTGACTCTAGGCACATAGTGTTGCATCTTGAGTATGCTGCAAAAAATGTCACGTGGGAGTCCCTATACCCAGAATGGATTGATGAGGAAGAGGAAACTGAAGTCCCAATTTGTCCCTCTCTACCAAGCCTCAGGTCTCCTGGAACAAGGCTTAATCTCATAGCTGTGAAGCTCCCTTGTCACAGGGCCAAAAATTCGAATTGGTCCAGAGATGTTGGTAGGCTTCACCTGCTGCTTGCTGCAGCAGGGCTTGCAGCCTCTTTCAAAGGCAATTACACCGTGCATGTGCTCTTCATTACCAATTGCTTTCCAATGCCAAATCTCTTTACCTGCAATGAACTTGTTGCACATGAAGGGAATGCATGGCTATACAGGCCAAACTTGAGTGTCTTGAGACAAAAAGTTCAGCTTCCAGCAGGATCTTGTGAACTTGCACTTTCCATGAGGGGTAAAGAGCTGGTATATGCTGGGAATGTTCACAGAGAAGCCTATGCAACAATCCTTCACTCAGCTCATGTTTATGTGTGTGGTGCTATAGCCGCAGCACAAAGTATTCGCATGTCTGGATCAACCAGAGACCTTGTGATACTTGTTGATGAGACTATAAGTGGATATCACAGAAGTGGTTTAGAAGCAGCAGGATGGAAAGTAAGAATAATTCAGAGGATCAGAAACCCAAAAGCTGAGAAAGATGCATACAATGAATGGAACTACAGCAAATTCAGATTATGGCAGCTTACAGACTATGACAAGATCATATTCATCGATGCAGACTTGCTCATACTGAGAAACATAGATTTTCTGTTTGGAATGCCAGAAATTACAGCCACGGGAAACAATGCCACACTCTTTAACTCAGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTTCTGATGGATCATATCAACGAGATTGAGTCCTACAATGGAGGAGATCAGGGATATTTGAATGAGATATTCACATGGTGGCACAGGATACCAAGGCACATGAACTTCTTGAAGCATTTCTGGGTTGGTGATGAGGAAGAGAAGAAGCAAATGAAGACAATGCTGTTTGGAGCAGACCCTCCAATCCTATATGTGCTTCACTATCTGGGAATGAAGCCATGGCTGTGCTTCAGGGACTATGATTGCAACTGGAACTTCGATATTTTTCACGAGTTCGCAAGCGACGTGGCTCATGAAAGGTGGTGGAGGATTCATGATGCCATGCCTGACGTGTTGCAGCAATTTTGCCTGCTTCAATCGAAGCAGAAGGCACAGTTAGAGTGGGATAGAAGGGAAGCTGAGAAAGCAAACTATACAGATGGACATTGGAGAATTAAGGTGAACGATTGGAGATTGAAGAAGTGTATAGATAATGTGTGTAACTGGAAGAGCATGTTGAGGCATTGGGGAGAGACGAACTGGACAGATGTCGAGTCTTATTATAATCCAACACCACCTGCAATTTCTACTACCAAAGCTTCTCTTTCTGGTTTATGA 1926 0.4335 MRATMGHSTHAVEARHRLPTSIEDLKRRLPRNKTKDVEKPFHLTSQDKSSRCKFSLLKLILLLTISGTFVTLIYAPEVYNTNHLSSSGSGWIWGGSDNRYISNEDIDWNDILAVSMKVTAKNELQGVGLLNFNNTEVEKWEKLMPDSRHIVLHLEYAAKNVTWESLYPEWIDEEEETEVPICPSLPSLRSPGTRLNLIAVKLPCHRAKNSNWSRDVGRLHLLLAAAGLAASFKGNYTVHVLFITNCFPMPNLFTCNELVAHEGNAWLYRPNLSVLRQKVQLPAGSCELALSMRGKELVYAGNVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLEAAGWKVRIIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNFDIFHEFASDVAHERWWRIHDAMPDVLQQFCLLQSKQKAQLEWDRREAEKANYTDGHWRIKVNDWRLKKCIDNVCNWKSMLRHWGETNWTDVESYYNPTPPAISTTKASLSGL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2382 641 FunFam Hexosyltransferase 303 555 - -
Prci4g2382 641 PANTHER GLYCOGENIN SUBFAMILY MEMBER 214 598 - -
Prci4g2382 641 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 303 553 IPR029044 -
Prci4g2382 641 Pfam Glycosyl transferase family 8 312 518 IPR002495 GO:0016757
Prci4g2382 641 CDD GT8_Glycogenin 306 551 - -
Prci4g2382 641 SUPERFAMILY Nucleotide-diphospho-sugar transferases 306 551 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2382 Prci-Chr4 36593286 36597362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2382 13 640 Glycosyltransferase AT3G18660 64.606 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2382 K20890 - gmx:100809361 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2382 4 36593286 36597362 Prci4g2382 4 36593286 36597362 ECH