Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2264 ATGGCCCCTCAGTGGCTGTTGGTCTGGGTAATGGCGTCCTTTCTCCATGCGAATGCAATGCCGATCACTTTTTCTGCGAGGCTGATTCATCGTTTCTCCCAAGAAATGAAGGCGCTCCGGGTTCCGAGTGGTGGTGGTCGTAATATGTCTGGTGGCTGGCCGGAGAGGAGGAGTATGGAATACTACGAGATGCTTGTTGGCGGCGACTTTCTTAGGCACAAGATGAAGCTTCGAGCACCGCATCAGTTGCTTTTCCCCTCTCATGGCAGCAAAACGATGTCGCTTGGAAACGACTTTGGCTGGTTACATTACACATGGATTGATCTGGGGACACCAAGTACTTCATTCCTTGTAGCACTGGATGCTGGGAGTGATCTGCTTTGGGTTCCATGTGATTGCATACAGTGTGCTCCTCTATCTGCTAGTTATTATGCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGATCAACATCCAGCAAGAACCTATCTTGCAGCCACCAGTTATGTGAGACGGGTTCCAACTGTAAAAGTTCCAGGCAACAGTGTCCTTACACTGTCAATTACGTCTCAGAGAATACCTCAAGTTCTGGATTTTTAGTAGAGGACATCTTGCATCTTGCGTCAAGTGGTGATGGTGAATCCAACTCTACAGTTCAGGCTCCAGTCGTTATAGGATGCGGCATGAAGCAGAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTCTTCTGGGTTTGGGAACGGGGGAAATTTCAGTTCCAAGTTTGCTTGCCAAATCAGGATTAATCCACAATTCTTTCTCAATGTGCTTTGACGATGATGATTCTGGTAGAATATTCTTTGGGGACCTTGGATCATCCATTCAACAGTCTACTGCATTCTTGCCACTGGATGAAACATATTCAACTTATATTATTGGAGTGGAAGCATGTTGTATCAAGGATTCATGTCTTAAGATGACTAGCTTCGAAGCACAGGTTGATAGTGGAACATCTTTTACATTTCTTCCAGGCCATGTGTATGATGCAATTGCCGAGGAGTTTGACCAACAAGTGAATGCTTCGAGATCTACCTTTGAAGGATCCCCATGGGACTATTGTTATGCATCTAGATCACCTGAGTTGCCCAGGGTTCCCTCCCTCACATTTACGTTCCAACAGAATAGCAGCTTTGTGGTCCATAACCCTGTATTTGTATTTTCTGACAATCAGGGAGTTATTGGATTTTGTTTAGCCATACAGCCAACAGATGGAGATATGGGAACAATTGGACAGAACTTCATGACAGGCTATAGGATGGTGTTTGATAGGGAAAACATGAAACTGTCCTGGTCACCCTCAAGTTGTCAGGATCTTGCTGGTAAGAGCATGCCCTTGTCCCCTCCAAATAAGACGCCACCAAAACCCTTGCCTACGAATGAGCAGCAGAGAACCAATGGGCATGCCATCGCCCCAGCCGTTGCCGGAAGAGCTCCTCACAAACCATCAACTGCTTCATCTCGGATGATGTCATGCCGACAACTTCATTGGCACATTTGTTTGTTTCTTCTTCTCCAGCTTGTAGTAGTAGCCTCTTTAAGGCTCTAA 1596 0.4612 MAPQWLLVWVMASFLHANAMPITFSARLIHRFSQEMKALRVPSGGGRNMSGGWPERRSMEYYEMLVGGDFLRHKMKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDLGTPSTSFLVALDAGSDLLWVPCDCIQCAPLSASYYANLDRDLNEYSPSRSTSSKNLSCSHQLCETGSNCKSSRQQCPYTVNYVSENTSSSGFLVEDILHLASSGDGESNSTVQAPVVIGCGMKQSGGYLDGVAPDGLLGLGTGEISVPSLLAKSGLIHNSFSMCFDDDDSGRIFFGDLGSSIQQSTAFLPLDETYSTYIIGVEACCIKDSCLKMTSFEAQVDSGTSFTFLPGHVYDAIAEEFDQQVNASRSTFEGSPWDYCYASRSPELPRVPSLTFTFQQNSSFVVHNPVFVFSDNQGVIGFCLAIQPTDGDMGTIGQNFMTGYRMVFDRENMKLSWSPSSCQDLAGKSMPLSPPNKTPPKPLPTNEQQRTNGHAIAPAVAGRAPHKPSTASSRMMSCRQLHWHICLFLLLQLVVVASLRL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2264 531 Gene3D Acid Proteases 78 286 IPR021109 -
Prci4g2264 531 Pfam Xylanase inhibitor C-terminal 326 448 IPR032799 -
Prci4g2264 531 SUPERFAMILY Acid proteases 97 455 IPR021109 -
Prci4g2264 531 PRINTS Pepsin (A1) aspartic protease family signature 328 339 IPR001461 GO:0004190|GO:0006508
Prci4g2264 531 PRINTS Pepsin (A1) aspartic protease family signature 424 439 IPR001461 GO:0004190|GO:0006508
Prci4g2264 531 PRINTS Pepsin (A1) aspartic protease family signature 109 129 IPR001461 GO:0004190|GO:0006508
Prci4g2264 531 PANTHER ASPARTYL PROTEASES 69 446 IPR001461 GO:0004190|GO:0006508
Prci4g2264 531 Pfam Xylanase inhibitor N-terminal 104 286 IPR032861 -
Prci4g2264 531 Gene3D Acid Proteases 288 454 IPR021109 -
Prci4g2264 531 FunFam Aspartyl protease family protein 1 89 286 - -
Prci4g2264 531 MobiDBLite consensus disorder prediction 457 479 - -
Prci4g2264 531 ProSiteProfiles Peptidase family A1 domain profile. 103 448 IPR033121 -
Prci4g2264 531 FunFam Aspartyl protease family protein 1 289 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2264 Prci-Chr4 35403408 35408908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2264 79 455 Miscellaneous Gene Families AT1G44130 26.750 4.61e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2264 - - gmx:100782209 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2264 4 35403408 35408908 Prci4g2264 4 35403408 35408908 ECH