Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2207 ATGGGCGGGCGAGGCAAGTCTCGCACCCAACGAAAGCATTTCCGGCAGAGCAGAGAGAATGAGTGGAAACGTTCAAAACCCGATCCTTCTTCTCAAGACCCTGACTCCACCACCGACAATCCCAATTCTACTTGGACTCCCTTCGCTACTCAGAACTCTACTTTTGATGAGTATTACAAAGAGCAGGGCATAGTACCTCCAGAAGAGTGGGATGCATTTGTTGCAGTTCTCAGAACCCCATTGCCTGCTAGCTTCAGAATTAACGCTTGTAGCCAGTTTTCTGCTGATCTTAGGTCGCAATTGGAGAAGGATTTTGTGCAAACTCTTCAGGCTGAGGTTGTTGAAGGGGATGAGGCAGAGGCCATTAAACCTTTGCCATGGTATCCTGAGAATCTTGCTTGGCATTCAAACTTCTCCCGTATGCAGCTGAGGAAGAATCAAGCGCTTGAGAGGTTCCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTACAAGACAGGAAGCTGTCAGCATGGTGCCTCCCCTCTTCTTGAATGTGCAGCCAAATCATTTTGTGCTTGATATGTGTGCGGCACCGGGTTCGAAAACATTCCAATTGCTTGAGATTATACATCAGTCAACTAAAACCAGTTCTCTTCCTGATGGAATGGTGATAGCAAATGATCTTGATGTCCAAAGATGCAATCTTCTCATCCACCAAACTAAACGGATGTGCACAGCCAACCTAATCGTCACTAATCATGAAGCTCAGAACTTCCCAGGCTGTCGTTTAGTCAGAAATCATGAATTGTTGGAACTAGAACAGCATATTGGCCAACTTTTATTTGATTGCATTCTCTGTGATGTGCCATGCAGTGGAGATGGAACCCTTCGCAAGGCACCTGATCTTTGGAGGAAATGGAATACTGGAATGGGCAATGGGCTTCACAGCCTGCAAGTTCTAATAGCTATGCGAGGCTTATCTTTACTTAAAGTTGGTGGAAGAATGGTCTATTCAACCTGCTCAATGAATCCAATTGAGAATGAAGCTGTGGTTGCAGAGGTTTTACGGAGGTGTGAAGGATCTGTTGAACTTGTTGATGTCTCAAATGAGCGCCCTCAACTTTTGCGTCGGCCTGGTCTCAAGAGATGGAAGGTACGCGACAAGGGCTTGTGGTTGGCTTCCTATAAAGATGTTCCCATGCATCGAAGAAGTGCAGTTCTTCCCAGCATGTTTCCTTCTGGCAAAAAGTATGAGGATCTTGTTGACAGTAATCATAAGGCGGTGATGGAAAATGATATTGATAAGGGTGTTTGTGTAAGCTCTGAAGACGGCAATCGAGCAGCAGAGAACCCTGTGACTTATAAGTTTATTGAGGAAGTTTCTGATTTACCACTAGAGCATTGCATGAGGATAGTGCCTCACGATCAAAACACTGGAGCTTTCTTTATTGCGGTACTGCAAAAGGTTTCTCCTCTTCCAGAGAAACGCAAAAATGGAATTGATAAGCAGCATGGAGAACCAGAGAACCAGGACATTGAGGATTCAAAGGAATTGCAGGTCGATTCATTAGAAAATACACGTGAGGAAGCTTTGGAAGCGGTTAATGTAATTAATAACAGACACAACACAGAAGATTTGGAAGCTAGTCCTTCTGGTGCATGTTTAGAAGGGGATTCAGAGGAAGTGCATAAGCCTCTTGAAACAGAAAGCATAGTAAAAATGACTCCAGGGAAAAGAAAGCTGCAGATTCAGGGCAAGTGGAGAGGCGTTGATCCTGTTTTCTTTTTCAGAGATGAAGTCACTATTAACAGCATAAAAGATTTTTATGGTATTGATCAAAGGTTTCCATTCAATGGTCATCTTGTCACTAGAAACAAAGATAGAGGCCATGTGAAAAGAATTTACTATGTCAGCAAGTCAGTCAAAGATGTTCTTGAACTGAATTTCTCAGTTGGGCAGCAACTCAAAATAGCATCCCTTGGTCTGAAGATGTTTGAAAGACAGACATCAAGAGAAGGAAGCTCAGCGCCATGTGCTTTCCGAATATCATCTGAAGGATTGCCTCTTATTTTGCCATACATTACTAAGCGAATTCTTTGTGCATCTCCTGGAGACTTCAAGCATCTTCTGCAGTACAAAACAATAAAATTTGCAGACTTTGTTGATGCCGGGTTTGGCAAAAAGGCAGAAAATCTAACGCCAGGCTATTGTGTGGTAGTTCTAAGCAAAGGGCGAAGAGAAGCATCAGAATTCATTCAGGTGGACGAGTCTACCATAGCCATTGGATGCTGGAAAGGTAGGGCCAGTTTGACAGTAATGGTAACTGCCATGGACTGCCGAGAACTGCTTGAAAGACTTTTAGTGAGATTCGACACCGGAAAGGGTTCCTCCGTGCGTGAGAACATGCCCTCCAGTAATGCCTTTGATGAAATACAGGGCCCTAACGTCATCGATGACTCGGCAGCTACAGGAGGCGACGATAGCTAA 2475 0.4388 MGGRGKSRTQRKHFRQSRENEWKRSKPDPSSQDPDSTTDNPNSTWTPFATQNSTFDEYYKEQGIVPPEEWDAFVAVLRTPLPASFRINACSQFSADLRSQLEKDFVQTLQAEVVEGDEAEAIKPLPWYPENLAWHSNFSRMQLRKNQALERFHEFLKLENEIGNITRQEAVSMVPPLFLNVQPNHFVLDMCAAPGSKTFQLLEIIHQSTKTSSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCRLVRNHELLELEQHIGQLLFDCILCDVPCSGDGTLRKAPDLWRKWNTGMGNGLHSLQVLIAMRGLSLLKVGGRMVYSTCSMNPIENEAVVAEVLRRCEGSVELVDVSNERPQLLRRPGLKRWKVRDKGLWLASYKDVPMHRRSAVLPSMFPSGKKYEDLVDSNHKAVMENDIDKGVCVSSEDGNRAAENPVTYKFIEEVSDLPLEHCMRIVPHDQNTGAFFIAVLQKVSPLPEKRKNGIDKQHGEPENQDIEDSKELQVDSLENTREEALEAVNVINNRHNTEDLEASPSGACLEGDSEEVHKPLETESIVKMTPGKRKLQIQGKWRGVDPVFFFRDEVTINSIKDFYGIDQRFPFNGHLVTRNKDRGHVKRIYYVSKSVKDVLELNFSVGQQLKIASLGLKMFERQTSREGSSAPCAFRISSEGLPLILPYITKRILCASPGDFKHLLQYKTIKFADFVDAGFGKKAENLTPGYCVVVLSKGRREASEFIQVDESTIAIGCWKGRASLTVMVTAMDCRELLERLLVRFDTGKGSSVRENMPSSNAFDEIQGPNVIDDSAATGGDDS 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2207 824 MobiDBLite consensus disorder prediction 793 807 - -
Prci4g2207 824 MobiDBLite consensus disorder prediction 1 49 - -
Prci4g2207 824 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 50 392 - -
Prci4g2207 824 Pfam 16S rRNA methyltransferase RsmB/F 178 366 IPR001678 GO:0008168
Prci4g2207 824 MobiDBLite consensus disorder prediction 14 30 - -
Prci4g2207 824 Coils Coil 509 536 - -
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 134 155 IPR023270 GO:0016428
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 362 381 IPR023270 GO:0016428
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 651 663 IPR023270 GO:0016428
Prci4g2207 824 MobiDBLite consensus disorder prediction 491 512 - -
Prci4g2207 824 Gene3D Vaccinia Virus protein VP39 49 401 IPR029063 -
Prci4g2207 824 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 10 794 IPR023267 GO:0001510
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase signature 328 344 IPR023267 GO:0001510
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase signature 467 484 IPR023267 GO:0001510
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase signature 278 290 IPR023267 GO:0001510
Prci4g2207 824 PRINTS RNA (C5-cytosine) methyltransferase signature 188 198 IPR023267 GO:0001510
Prci4g2207 824 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 485 IPR029063 -
Prci4g2207 824 MobiDBLite consensus disorder prediction 31 49 - -
Prci4g2207 824 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 73 485 IPR001678 GO:0008168
Prci4g2207 824 MobiDBLite consensus disorder prediction 791 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2207 Prci-Chr4 34577924 34587184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2207 K15334 - gmx:100808859 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2207 4 34577924 34587184 Prci4g2207 4 34577924 34587184 CCT
Prci4g2207 4 34577924 34587184 Prci4g2207 4 34577924 34587184 ECH