Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2186 ATGTGGTGGATGATGGGAGAAGCTGGAGGCCATTACTGTTCCAAGAAGACCGATGATTTGTGCGGCGATGTTTGTGGTGATCAGGGATCAAGCCAAGTATCAGGCATGTCAAGAGTTCGATGCATTTTGCGTGGTTTGGATGTAAAGACCTACATATTTCTTTTTGCTGTCCTCCCGATGTGTATCTTTGGAATTTATATACATGGACAGAAAATTTCATACTTTCTGCGGCCACTTTGGGAAAAACCACCCAAGCCTTTCAAGGTTATCCCGCATTACTACAATCAGAATGTGTCAATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGTGCCTCCCCAAGACGTGTTTATGATGCTGTGTTATTCAGTAATGAGTTGGAAATACTGAATTTACGGTGGAGAGAATTGTATCCTTACGTATCAGAATTTGTCCTTCTTGAGTCAAATTCTACGTTCACTGGATTGTCGAAGCCTCTTGTGTTTAAAAGCAATCGGGAGCGGTTCAAATTTGTTGAGCCCCAGTTGACATATGGGACTATTGGCGGAAGATTCAAGAAAGGAGAAAACCCGTTTGTTGAGGAGGCCTATCAACGAGTAGCACTGGACCAGCTTCTTAAGATAGCCGGTATTTCAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATACCGAGCGCTCACACTGTCAACCTTTTAAGGTGGTGTGATGACATACCATCAATCCTCCATCTTCAACTCAAGAATTATCTTTATTCCTTTGAGTTTCATGTGGATAATGACAGCTGGAGGGCTTCAGTTCACAGGTATCAGAGCGGAAAGACAAGGTATGCTCATTTTCGCCAGTCTGATGACTTGTTAGCAGATGCTGGCTGGCATTGTAGCTTTTGTTTCCGCCGAATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCATTATGACAGAGTAAGGTTCTCTCATTATTTAAATCCCAAAAGAATTCAGAAAGTAATCTGCAAAGGGGATGACTTATTTGACATGCTTCCAGAGGAGTACTCCTTCAAGGAAATCATTAGTAAAATGGGACCTATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTATCTTTTGGAGAACGCAGAGAAGCTCAAATTTCTTTTGCCCGGAAATTGTGTAAGAGAGAGTGAATGA 1182 0.423 MWWMMGEAGGHYCSKKTDDLCGDVCGDQGSSQVSGMSRVRCILRGLDVKTYIFLFAVLPMCIFGIYIHGQKISYFLRPLWEKPPKPFKVIPHYYNQNVSMENLCRLHGWGVRASPRRVYDAVLFSNELEILNLRWRELYPYVSEFVLLESNSTFTGLSKPLVFKSNRERFKFVEPQLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTVNLLRWCDDIPSILHLQLKNYLYSFEFHVDNDSWRASVHRYQSGKTRYAHFRQSDDLLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPKRIQKVICKGDDLFDMLPEEYSFKEIISKMGPIPHSYSAVHLPAYLLENAEKLKFLLPGNCVRESE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2186 393 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 36 392 IPR006813 GO:0003830|GO:0006487|GO:0016020
Prci4g2186 393 Pfam Glycosyltransferase family 17 46 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2186 Prci-Chr4 34253727 34256605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2186 1 393 Glycosyltransferase AT1G12990 77.354 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2186 K00737 - gmx:100816069 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2186 4 34253727 34256605 Prci4g2186 4 34253727 34256605 CCT
Prci4g2186 4 34253727 34256605 Prci4g2186 4 34253727 34256605 ECH