Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2165 ATGAAATGTGTCTCCGTGATCTCAACCTGTTTTCTTCTTTTTTTGTGTATTCAGAGCGTGACATCTAAAAATATATCTGACAATGAAAGAAGCCTTCGGCAAGCAAGTACCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGCGCAGAGGTCATCTCCCAGCGTCTCCATGCTCATGGATATGAGTATGTTGTGGTGGATTACCTTTGGTATAGAAGGAAAGTTGAGGGTGCTTATACTGATTCTCTTGGATTTGATGTGATTGATGGATGGGGAAGAATGAGGCCTGATCCACAAAGGTGGCCTTCTTCTAAAGATGGGAAAGGGTTCAAAGAAGTGGCTGATAAAGTACATAGCATGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGTACTCAAGCAGTCAATGCAAACACCCCTATCCTTGATCCAAGGAAGGGAACAGAATCTGGTAAAGTGTGGCGAGCAAAGGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACGAAGCTTGGGGCTGGAAGAGCCTTTTTGAGGTCCCTCTATGAGCAGTATGCTGCATGGGGTGTTGATTATGTGAAACACGACTGTGTGTTTGGCGACGACTTAGATTTGAATGAAATAAGATACGTTTCAGAGATTCTCAGGGCACTTGATCGCCCCATTATATACTCTCTGTCCCCTGGAACCAGTGTGACACCAGCAATGGCCAAGGATGTCAGTGGACTAGTTAACTTATATCGCATAACAGGAGATGACTGGGATACATGGGGTGATGTTGTGGCTCATTTTGATGTGACAAGGGATTTTTCTACTGCTAATATGATAGGAGCAAGAGGTTTAAGGGGATATTCATGGCCTGATTTAGATATGCTACCATTGGGATGGCTAACTGATCCAGGTTCAAATGCAGGTCCACACAGGTATGGACGCCTTAATCTAGAGGAGCAAAAAACTCAGATGACTCTGTGGGCTATGGCAAAGTCTCCTCTCATGTATGGAGGGGATGTGCGGAAGCTTGACCAAACGACATATAATCTCATCACAAATCCAACTCTTCTGGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTTCCATATATCACTAGCTTGATGAATATGGAGATTCAAGGACATAATCTTGCCGGGCAAATGATAGGATCTAAGAGAAGTAGGCAAACATCAAATACACATTTAATTGATCTCACTGGCTGTACTGAGTCAAAGGCAATTGGTTGGTCTATTGAAACTCTTAACGAACATGTGGAAAGAATCTGCTGGACAAGGAGCTCAGGAAACAACCATCAGGCACCTTTCTGTGTGCATAAGAGAGAAATTCGTGTGGCATTAGAAAAGAGTACAAATCAAGAAGACTATAGAAGGAAACATCATTTAGCTGCAGCCAACACTGAGCAACTTTGTCTTGAAGCTTCTCCAAAAAGAAAGCTTACTTCTAAAGAATTTAAGAGAGGCACATTTTCTCCTTGCAGATGGGATGCAAATCAGATGTGGGAATTGAACCCTAATGGGACCCTGGTAAATAGTTATTCCAGCCTGTGTGCAACAGTAGATTCTGCAAAAGCTAAAACTCATACTCTTCATGGGATTCGTTCTTGGATTGCAAAAGGAAGGCGAGGAAAAGTCTATGTAGCTTTCTTCAACCTAAATGAACAGAGGACAGTGATATCTGCAAAGGTGTCAGACCTGGCCAAGGTAATTCCTGGCAGCTATAATGCCTGTAAGGGCAAGGAAGTGTGGAGTGGAAAGGCCATTAACACAAAACACGGGACGCTTTCAGCGGAAGTAGAAAAACATGGGTGTGCACTTCTTGTCCTTATTTGCCACTAA 1920 0.4266 MKCVSVISTCFLLFLCIQSVTSKNISDNERSLRQASTPPRGWNSYDSFCWTISEEEFLQSAEVISQRLHAHGYEYVVVDYLWYRRKVEGAYTDSLGFDVIDGWGRMRPDPQRWPSSKDGKGFKEVADKVHSMGLKFGIHVMRGISTQAVNANTPILDPRKGTESGKVWRAKDIAIPERACAWMPHGFMSVNTKLGAGRAFLRSLYEQYAAWGVDYVKHDCVFGDDLDLNEIRYVSEILRALDRPIIYSLSPGTSVTPAMAKDVSGLVNLYRITGDDWDTWGDVVAHFDVTRDFSTANMIGARGLRGYSWPDLDMLPLGWLTDPGSNAGPHRYGRLNLEEQKTQMTLWAMAKSPLMYGGDVRKLDQTTYNLITNPTLLEINSFSSNNMEFPYITSLMNMEIQGHNLAGQMIGSKRSRQTSNTHLIDLTGCTESKAIGWSIETLNEHVERICWTRSSGNNHQAPFCVHKREIRVALEKSTNQEDYRRKHHLAAANTEQLCLEASPKRKLTSKEFKRGTFSPCRWDANQMWELNPNGTLVNSYSSLCATVDSAKAKTHTLHGIRSWIAKGRRGKVYVAFFNLNEQRTVISAKVSDLAKVIPGSYNACKGKEVWSGKAINTKHGTLSAEVEKHGCALLVLICH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2165 639 Pfam Alpha galactosidase A 206 380 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 Pfam Alpha galactosidase A 51 146 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 SUPERFAMILY (Trans)glycosidases 35 380 IPR017853 -
Prci4g2165 639 Pfam Alpha galactosidase C-terminal beta sandwich domain 560 636 IPR041233 -
Prci4g2165 639 CDD GH27 38 380 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 SUPERFAMILY Ricin B-like lectins 495 554 IPR035992 -
Prci4g2165 639 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 PRINTS Glycosyl hydrolase family 27 signature 230 248 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 PRINTS Glycosyl hydrolase family 27 signature 338 359 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 Gene3D Aldolase class I 29 383 IPR013785 -
Prci4g2165 639 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 6 637 IPR002241 GO:0004553|GO:0005975
Prci4g2165 639 SUPERFAMILY Glycosyl hydrolase domain 558 636 - -
Prci4g2165 639 Gene3D - 553 638 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2165 Prci-Chr4 34121228 34127452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2165 8 473 Glycoside Hydrolase AT3G26380 65.823 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2165 - - gmx:100777954 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2165 4 34121228 34127452 Prci4g2165 4 34121228 34127452 CCT
Prci4g2165 4 34121228 34127452 Prci4g2165 4 34121228 34127452 ECH