Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2155 ATGAACACGAAGATGGGGAGGCCTTCCCTCTGGTTGAGGTTGGCTCTGATCTGCACCATTCCGATTCTAATGGCGTCGTCTCAACCACTGTACACGACTTCGAGGTGGATCGTGACGGAAGACGGCGAGCGCGTGAAGCTGGCGTGCGTGAATTGGGTGTCGCATCTGGAACCCTTACTTGCAGAAGGTCTGAGCAAGCAACCTGTGGATGTGATCTCCAAACGAATCAAATCGATGGGATTCAACTGCGTGAGATTCACTTGGCCGATCCTGCTCGTCACCAACGACTCTCTCGCCTCCCTCACTGTGAGACAGTCCTTCCTCAACCTCGGCCTCCTCGAATCCATCGCCGGCATCCAATCCAATAATCCATCTATCGTCGATCTCCCCCTCATCCAAGCTTACCAGTGGGTGGTGGAAAGGATGGGGGAGGAGGATGTGATGGTGATATTGGACAACCACATGACAAAGCCGGGGTGGTGCTGCAGCAACTCCGACGGGAATGGGTTCTTCGGCGACCGGAATTTCGACCCTGAGCTGTGGGTAGAGGGGCTCACCAAGATGGCTTCGCTGTTCAATGGAGTGACCAATGTGGTGGGAATGAGCCTGAGGAATGAACTTCGAGGCCCCAGACAAAACGTGAACGATTGGTATAGGTACATGACAAAAGGAGCAGAAGCAGTGCATGCAGCAAACAAGGACGTTCTTGTGATTCTGTCAGGCCTAAACTTCGACAAAGACTTATCCTTCCTCAGGAACCGACCAGTAAAGCTAACGTTTCAGAGGAAACTAGTATTCGAAGTCCACTGGTACGCCTTCACGGACGGTCAAGCATGGATCGAAGGCAACCCAAATCAAGTGTGTGGACAAGTTTCAGGAAACGTGATGAGACTAGCAGGTTATTTGGTGGAACAAGGGTGGCCATTGTTTGTGAGCGAGTTTGGTGTGGACTTAAGAGGCACCAACGAGAACGATAACAGGTACTTGAGTTGTTTCTTGGGTTTGGCTGCTGAACATGACTTGGATTGGGCATTGTGGACCCTTGTCGGAAGCTATTACCTCAGGCAAGGGGTTGTTGGAATGAATGAGTACTATGGACTTCTCAATTGGGATTGGCGTGATGTCAGGAATTCAACTTTCTTACAGAGGATCTCTGCTCTCCAATCTCCTTTCAGAGGGCCAGGAATATCAGAAGGCAGGCAACACAAAGTGATATTCCATCCATTGACGGGTCGCTGCATTCAAAGAAAATCACTGGTTGATCCTTTGAAGTTAGGACCCTGCTCTGAAGCTGAAGGCTGGAAATACACACCCCAGAAGATCCTAACATTAAAGGGCACATATTTCTGCTTACAACCAGACGATATAGGGATGCCGGCTAAACTAAGCATAATTTGTTCGGGGCCTAATTCAAAATGGGACATAGTCTCAGAATCTAAGATGCACATCTCATCAAAACTTTCAAACGGTTCATCTGTTTGTCTAGATGTGAATTCCAACAACATCCTCGTTACCAACACTTGCAAATGCTTGAACCGAGATCGTACCTGTGATCCTGCGAGCCAATGGTTCAAACTTGTCGACGCCACGAGAACTTCAATCTCAACTCAATCATTAACGTTACCTGTAGACTCAGATTTAACAGGAATAATCTCTCACTGGGAATCAGTGAGCTCAATTTAA 1683 0.4848 MNTKMGRPSLWLRLALICTIPILMASSQPLYTTSRWIVTEDGERVKLACVNWVSHLEPLLAEGLSKQPVDVISKRIKSMGFNCVRFTWPILLVTNDSLASLTVRQSFLNLGLLESIAGIQSNNPSIVDLPLIQAYQWVVERMGEEDVMVILDNHMTKPGWCCSNSDGNGFFGDRNFDPELWVEGLTKMASLFNGVTNVVGMSLRNELRGPRQNVNDWYRYMTKGAEAVHAANKDVLVILSGLNFDKDLSFLRNRPVKLTFQRKLVFEVHWYAFTDGQAWIEGNPNQVCGQVSGNVMRLAGYLVEQGWPLFVSEFGVDLRGTNENDNRYLSCFLGLAAEHDLDWALWTLVGSYYLRQGVVGMNEYYGLLNWDWRDVRNSTFLQRISALQSPFRGPGISEGRQHKVIFHPLTGRCIQRKSLVDPLKLGPCSEAEGWKYTPQKILTLKGTYFCLQPDDIGMPAKLSIICSGPNSKWDIVSESKMHISSKLSNGSSVCLDVNSNNILVTNTCKCLNRDRTCDPASQWFKLVDATRTSISTQSLTLPVDSDLTGIISHWESVSSI 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2155 560 Pfam Cellulase (glycosyl hydrolase family 5) 70 348 IPR001547 GO:0004553|GO:0071704
Prci4g2155 560 CDD RICIN 403 508 IPR000772 -
Prci4g2155 560 SUPERFAMILY Ricin B-like lectins 400 526 IPR035992 -
Prci4g2155 560 Gene3D Glycosidases 26 389 - -
Prci4g2155 560 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 17 531 - -
Prci4g2155 560 SUPERFAMILY (Trans)glycosidases 26 382 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2155 Prci-Chr4 33958455 33963270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2155 19 531 Glycoside Hydrolase AT1G13130 61.122 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2155 - - gmx:100790415 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2155 4 33958455 33963270 Prci4g2155 4 33958455 33963270 ECH