Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2154 ATGAAAATGGTGCCCCAATTGATGCAATCAATGGCTAGACGCCTTACATTATCAGCATCAGATGACAATGCAGTGATGAAACAAGTCGTTGCCACTCATGCTCCTGTTGACAGACATGTTGACGTTAGGCCTCTTCTTAACGTTGTTCAAGACATCTTGCATCGTATCACCACTGTCATCCCCCCTGTTGTTCAGGGGAAGCAAGCAACCTTGGATGCGGTGGGTGACAATGCTCTCGCTCCTCACATGCGTGATAATTTGTCCCACACAATCAGCAAAATTTCCTGCGAGATATCTTACAAGTGTTCTACTGGTGGAAACTCTCATTCGACAACTATGGGAATTCTGGGCATGCTTTCAAGCTATTCATGGGATTCAAAGGCGGTGATAGCTTTAGCAGCCTTTGCATTGAACTTTGGGGAGGTCCGGCTGGTGGCTCAGCTTTATGGCACCAACCCACTTGCTAAGTCAATTGCAATGTTGAAGCATGTTCCTGAAACACAGAATCGAGACGATATTATGGGACTGCAACATAGGTATGAAGTGATCAGCAACATTGTCAAGGTCATGTTGGATGTGACCAATTGCATTGTAGCATTTGAGGAGCTCCCCTCTCAGTACAAAACACCCGACACGCCGCAGATGTCAGCTGTCACCACTTTGATTCCCATTGCCGTCTATTGGACCATTCGGAGTATCCTAGCTTCTGCATCTCAAATTTCGGGCTTCCTGAGCATGAATCAGTATGTCTGTCTGGCTTCTCCACATATATCATTGGTGTCAGAGGTTTGGGAACTTTCAAGTCTGGCTCACAAGCTCAATAACATACACAACCAACTTCAGACTGAACTTGCCCTTTTACAAAGGCAGATTGAGGACAATAAACAAACTGAAGCTTTTGAGACACTTGTACGTCTTTTTAATGCGTCTCACTCTGACAACATGGAAATTCTTCAAGGTTTGTTTTACTTCAAGGGCGACCAACTACCGCTTCTTGATGGTTCTACCAAGCAAAGGGTAAGCATTGATGAATTAAGGAGTAAAATTGTGCTGCTATTCATATCAGATCTCAATCTCTCTAACCAAGAGATCATGATTCTTGGAGAAATGTATCTCGAGTCACGTCAGGAACCAGACATGTTCCCGATTCCATTTGATGTCGTTTGGCTTCCAGTTGTTAACAAGGGAATCCCATGCTCTGAAGTGAAACGGAAGAAGTTGGAGGGGTTACAATCAGCAATGCCATGGTACTCAATCTATGACCCTTGGCAGATAGAGCAAGCAGTCATTAAGTACATTAAGGATGTGTGGCATTTCAAGAAACGGCCTATACTTGTTGTGTTGGACCAGCAAGGAAAGGTTGTCAACCTAAACGCTTTACACATTATGTGGATTTGGGGATGCTTGGCTTACCCTTTTGCAGTCTCACACGAGGAATCCATTTGGAAGGAACAAACATGGGGACTTCAGCTATTGGCAGATATGTTCTGTCCATTAACCTGGATATCAGAAGGGAAATATGTATGCTTGTATGGAGGTGAAAATCTGGAGTGGATCAGGAAACTCACAAGAAATGCATACGCCATGGCTGAGACTCTGCAAGTCCCACTGGAAATGATATATATGGGGAGAAGCAATCCAGGAGAGAAAGTGGAGAAGAACAAGGAAGCCATAATTTCAGAGAATATCAGCCATGCACTGGAGGACCTGACATTAATATGGTACTTCTGGGTTAGGGTAGAGAGCATGTGGCACTCCAAGTTACAGCAGGGGAAGACAGTAGACAGTGACCCCATAATGCAGGAAGTGATGACAATTGTAAGCTTTGACAGAAGCGGCGATGAAGGATGGGCTGTGATGGGAAGAGGAACGGAGAAGATGGTGAAAGCACAAGGAGAAATATTTCTGAAGTGTGTTAGTGAGTATCAGAAATGGAAGCACAAAGCAAAAGAGAAAGGGCTTTTGACAGCAATGGATGAATACATAAAAGAGCTAAGAACCCCACACCACTGCATCAGATTGATAGTGCCAGGAAGCAATGGCAGAAGCCCAGAAGAAGTGACCTGCGCTGAATGTGGCCGTACCATGGAAAAGCTCTTCATGTACCGTTGTTGCGATGATTAA 2124 0.4454 MKMVPQLMQSMARRLTLSASDDNAVMKQVVATHAPVDRHVDVRPLLNVVQDILHRITTVIPPVVQGKQATLDAVGDNALAPHMRDNLSHTISKISCEISYKCSTGGNSHSTTMGILGMLSSYSWDSKAVIALAAFALNFGEVRLVAQLYGTNPLAKSIAMLKHVPETQNRDDIMGLQHRYEVISNIVKVMLDVTNCIVAFEELPSQYKTPDTPQMSAVTTLIPIAVYWTIRSILASASQISGFLSMNQYVCLASPHISLVSEVWELSSLAHKLNNIHNQLQTELALLQRQIEDNKQTEAFETLVRLFNASHSDNMEILQGLFYFKGDQLPLLDGSTKQRVSIDELRSKIVLLFISDLNLSNQEIMILGEMYLESRQEPDMFPIPFDVVWLPVVNKGIPCSEVKRKKLEGLQSAMPWYSIYDPWQIEQAVIKYIKDVWHFKKRPILVVLDQQGKVVNLNALHIMWIWGCLAYPFAVSHEESIWKEQTWGLQLLADMFCPLTWISEGKYVCLYGGENLEWIRKLTRNAYAMAETLQVPLEMIYMGRSNPGEKVEKNKEAIISENISHALEDLTLIWYFWVRVESMWHSKLQQGKTVDSDPIMQEVMTIVSFDRSGDEGWAVMGRGTEKMVKAQGEIFLKCVSEYQKWKHKAKEKGLLTAMDEYIKELRTPHHCIRLIVPGSNGRSPEEVTCAECGRTMEKLFMYRCCDD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2154 707 Pfam Sieve element occlusion N-terminus 20 311 IPR027942 -
Prci4g2154 707 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 5 706 IPR039299 GO:0010088
Prci4g2154 707 Coils Coil 270 297 - -
Prci4g2154 707 Pfam Sieve element occlusion C-terminus 477 705 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2154 Prci-Chr4 33954129 33958772 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2154 - - gmx:100799626 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2154 4 33954129 33958772 Prci4g2154 4 33954129 33958772 CCT
Prci4g2154 4 33954129 33958772 Prci4g2154 4 33954129 33958772 ECH