Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2148 ATGAATCCTCTTTGCTGCATTGCTCCCGTTTCGATCGATCGGGACCGGGCCAACCCTGTTGTGCCTAAATCACCTGCTCAGTGTCAGTTAGGATTGGATGCGTCTGTGAAAACTGTTAACTGTGGTTCGAAACCCAGCTTTTCTACTGTTGATTCATCGCTTGGTTCTGATTCCAACAAGGCGTTGGTCACTTCGAACCACGATGAGGAGGAGGCGGTCAATGAAGCTAGAGATTCCAAGGTGTTCAGCGGCACTGTGGCTGGGATTTTGTACAAATGGGTGAATTATGGCAAGGGTTGGAGGTCCAGGTGGTTCATGCTTGAGGATGGGGTGCTTTCTTATTACAAGATTCATGGTCCTGACAAGATTTGGATGAGTCCGGCTAGAGATAGGAGTGTTAGGGTGATCGGTGAGGAGTCATCTAAGTATATGAAGAAAGCAAATTGGAATCTAAATCGGCAGGGGGGCGCCACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTGCCAGCAAGTCTGATGACAAGCGACTTTCCATATTTACTGGCACAAAAACTCTTCACTTGCGTAGTATATCTAGAGAAGACAGAGCTATGTGGATTGAAGCTCTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTCTAACAAGCAGTGATCTTGCTACCTCAGAAGATATTGTAGTTTCCACAGAAAAGTTGCGGTCACGATTATCACAAGAAGGCATAGCTGAGGTAGTTATTAAAGACTGTGAATCAATCATGCTTTCTGAAGTCTCTTACCTTCAAGACCGCCTGAAATTTCTTCATCAAAAACATGTGGTGTTGCTGGACACCTTAAAACAGCTAGAGACTGAGAAAATAGAGTTGGAAGCTACAGTGGTGGATGAAACAAAGGAACGTGAGTCATACTGTGGAACAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCGGAAGGCAGTGCTTCTGATTCTGTAGCGGATAATGAAAGTCAGGATGGAGGGGATGTTGAAACAGATGATGATGATGGAACATATTTCGACACAAACGACTTTCTGTCTTCAGATGCTTTAAGAAGTGCGTCCTACCGAAGTAGGGAAGGTGTGGGAAATTCTTGTATATATGACAGAGATTCTTTCTTTTCTGATGGTTTGCGTGGGTTTGAGAAGGGAATTAAAGATATAAAATATCCATATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGAGAAGCCTGTTGGTTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTGCCTGTTTATTTTAATGAGCCACTCTCTTCATTACAAAAGTGCTTTGAAGACTTGGAGTATTCATACTTGGTTGATAGAGCGTCAGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCTGGCTATGCTTCAACAGAAGGGAGGCAGTGTAAACCTTTTAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTCAGGTTTTTCTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGCGAGGGAATAGGATGGAAATTCTGGGCAGATTCCAATTTGAAAGGCAAGTTTTGGGGACGTTCTATCCAGCTGGATCCTGTGGGTGTCCTCACCCTTCAGTTTGAAGATGGTGAAACATTTCAATGGAGCAAGGTCACCACTTCAATATACAATATCATACTAGGAAAAATTTATTGTGATCACTATGGGACCATGCGCATCAAAGGCAGTGGCAACTACTCCTGCAAGCTCAAGTTCAAAGAGCAATCTATAATTGACCGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAATAGAACTGGAGAGAAGGTAGCAATGTTGATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGATCCGACTACAAAGCCTAAAGGGTATGATCCAATGACAGAAGCTGTATTATTGTGGGAAAGGGACCCTTACCTTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAACACCCGGTTTATTGGAAAAGTTGCCTCCAACCGATTCAAGGCTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATACGAGTTGGCAAATGCAGAGAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAGGATGCAGGAAAGAGGGTGGCAACCTAGATGGTTCCAAAAAGACGAAGACGGCTCTTACAGATATGTGGGTGGCTACTGGGAAGCGAGAGAGAACAAGAACTGGGATGGGATTCCTGATGTATTTGGGCAGTCTTGTGACTTGCCTTCCTGCTCTGAAGAGACTCTATTCTAG 2415 0.4311 MNPLCCIAPVSIDRDRANPVVPKSPAQCQLGLDASVKTVNCGSKPSFSTVDSSLGSDSNKALVTSNHDEEEAVNEARDSKVFSGTVAGILYKWVNYGKGWRSRWFMLEDGVLSYYKIHGPDKIWMSPARDRSVRVIGEESSKYMKKANWNLNRQGGATKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRSISREDRAMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGIAEVVIKDCESIMLSEVSYLQDRLKFLHQKHVVLLDTLKQLETEKIELEATVVDETKERESYCGTGNRRFSDFYSVMSEGSASDSVADNESQDGGDVETDDDDGTYFDTNDFLSSDALRSASYRSREGVGNSCIYDRDSFFSDGLRGFEKGIKDIKYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRASEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGIGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAVLLWERDPYLTKTRYNLSPFAISLNEITPGLLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARRMQERGWQPRWFQKDEDGSYRYVGGYWEARENKNWDGIPDVFGQSCDLPSCSEETLF 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2148 804 SUPERFAMILY Oxysterol-binding protein-like 419 791 IPR037239 -
Prci4g2148 804 Pfam Pleckstrin homology domain 88 212 - -
Prci4g2148 804 CDD PH_ORP_plant 86 219 - -
Prci4g2148 804 Gene3D - 510 676 - -
Prci4g2148 804 Gene3D - 721 786 - -
Prci4g2148 804 Coils Coil 278 305 - -
Prci4g2148 804 Coils Coil 732 752 - -
Prci4g2148 804 FunFam oxysterol-binding protein-related protein 1D isoform X1 510 683 - -
Prci4g2148 804 FunFam Oxysterol-binding protein-related protein 2A 721 791 - -
Prci4g2148 804 Gene3D - 83 217 IPR011993 -
Prci4g2148 804 SMART PH_update 84 217 IPR001849 -
Prci4g2148 804 MobiDBLite consensus disorder prediction 328 351 - -
Prci4g2148 804 Pfam Oxysterol-binding protein 425 778 IPR000648 GO:0008289
Prci4g2148 804 SUPERFAMILY PH domain-like 86 220 - -
Prci4g2148 804 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 85 777 IPR000648 GO:0008289
Prci4g2148 804 ProSiteProfiles PH domain profile. 83 215 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2148 Prci-Chr4 33849923 33856819 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2148 K20456 - gmx:100788779 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2148 4 33849923 33856819 Prci4g2148 4 33849923 33856819 ECH