Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2096 ATGCCTCCCTCGTATTTTCCGCTTCGTTGGGAGAGCACTGGAGATCAATGGTGGTACGCGTCGCCAATTGATTGGGCGGCGGCGAATGGGCTCTACGATCTGGTGGCGGAGCTTCTTCACCTGGACTCTAATTTGCTTATTAAGCTCACCTCCCTCCGTCGAATCCGCCGCCTTGAAACCGTCTGGGATGACGAATCTCAATTCGACGACGTCGCTAAATGTCGTTGTCACGTTGCGAGGAATCTTCTTCGCGAATGTGAAACTAGAAGAGGGCATAACTCTCTTATTCGTGCTGGCTATGGTGGGTGGCTGCTTTATACTGCTGCCTCTGCCGGAGATGTTGATTTTGTTCTGGAATTGTTAAGGAGAGACCCGTTTCTGGTGTTCGGAGAAGGAGAGTATGGAGTCACTGATATCCTGTATGCTGCAGCTAGAAGCAAGAACTCTGAGGTCTTCAAGATTCTTCTTGACTCCGCACTTTCGCCCAGAGATTGCTGTGTCACTGAAGCAGAATTGGATGAAAGTGGTAGGATTTTCAAGAAAGACATGATGAATAGGGCCATTCATGCTGCCGCGAGAGGAGGGAATTGGGAGGTATTGAAGCAGCTTCTTGGAAGTGATTCTGACATTTTAGCTTTTAGAGATGCACAAGGATGCACAGTTCTGCACGCAGGAGCTGGCAGAGGGCAAGTTGAGGTGGTGAAAAATCTACTAGAATCATCAGAGATTATCACCTCAACTGATGCACAAGGGAACACTGCCTTACATGTGGCTTCTTACAGGGGTTACTTGCCTGTGGTGGAGATCCTGATTTTTGCATCTCCCGAATCAGCATTCTTAACCAATCACCATGGAGACACTTTTCTTCATATGGCAGCGGCTGGCTTCAAAAGCCCAGGTTTCCAGAGACTGGACAAGCACACTGAGCTAATGAAGCACGTTGTTAGTGGAAAGATTGTGAAGATGCAGGACATCATCAATGTCAGGAACAACGAAGGAAGAACAGCTCTTCATGTAGCTGTCATTGATAACATCCAATGTGATGTAGTGGAAATGTTAATGTCTGTCCCATCCATTGATTTGAACATTCGTGATGCTGATGGGATGACTCCCCTTGATCTTCTGAAGCGAAGACCTCAATCAACTTCCTCGGAGATTTTGATCAAGCAGTTGATTTCAGCTGGAGGAATATCTAATTATCCTGATTATTTGGCTAGAAATGTCCTTCGCTCTCATCTGAAATCCCATGGCATTGGAAGGAGTCCTGGAACTTCTTTTAGAATTCCAGACGCAGAGATATTTCTATACACTGGCGTTGACAATGCATCATCAGAAATCAACTATGATCAAGCAAGTGTGAAATCTAATTCTTGCTCAGGTGAACTTAGCACTTGTGAGTCAGCCAACTCCCCGAATGACAAGTCTGGTTCTGTTAAATTTGCTGCAAGGCGTTTAAAGTTTTTTCTTCGGTGGCCTAAAAAGAAAGAAAGAGAAGCCAGTGCCTTGAAGCTGGAAGATGATGAAGATAATTTTTCGGTGTATTCTTTCAGTTCAAGGAAGAACATGGAAAACATCCCAATCCCATTACGGCAAAGATACTCAAATTTCTGTTCTCTTCCAAACAACAAAAGAACGCTATCTGTTAGGACTTATCTTCCAAGTCCATCCACCAAAGAGAAATTTACTGCTGGCCTATCACAAGGTGTAATTCAGGTAAACCCACTTCTGGCACTTCCTGGTCCTTTTCTGAAATCATCCATGGCTTCACTTACTTCCATTAATGAGCAAAGAGATGGCAATATCATGGGACCCTCTTGCTCCAATCAATCAATAGATGAAGGTACTCTACAATCCAGCCATAGACAGGGTTCATTCAGAAAGAGATTGATGAATAGGTATCTATCTTTTGGAGCACAAGGCCTGGGTGTGGAAGATTCAAATAGCTGCACAATTTCAAGCCGTAGTTATAATCGTTTCAGCTCTTTAGTTGCGTAA 1995 0.4446 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDSNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETRRGHNSLIRAGYGGWLLYTAASAGDVDFVLELLRRDPFLVFGEGEYGVTDILYAAARSKNSEVFKILLDSALSPRDCCVTEAELDESGRIFKKDMMNRAIHAAARGGNWEVLKQLLGSDSDILAFRDAQGCTVLHAGAGRGQVEVVKNLLESSEIITSTDAQGNTALHVASYRGYLPVVEILIFASPESAFLTNHHGDTFLHMAAAGFKSPGFQRLDKHTELMKHVVSGKIVKMQDIINVRNNEGRTALHVAVIDNIQCDVVEMLMSVPSIDLNIRDADGMTPLDLLKRRPQSTSSEILIKQLISAGGISNYPDYLARNVLRSHLKSHGIGRSPGTSFRIPDAEIFLYTGVDNASSEINYDQASVKSNSCSGELSTCESANSPNDKSGSVKFAARRLKFFLRWPKKKEREASALKLEDDEDNFSVYSFSSRKNMENIPIPLRQRYSNFCSLPNNKRTLSVRTYLPSPSTKEKFTAGLSQGVIQVNPLLALPGPFLKSSMASLTSINEQRDGNIMGPSCSNQSIDEGTLQSSHRQGSFRKRLMNRYLSFGAQGLGVEDSNSCTISSRSYNRFSSLVA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2096 664 ProSiteProfiles Ankyrin repeat region circular profile. 250 271 - -
Prci4g2096 664 SMART ANK_2a 250 279 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 18 47 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 183 212 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 217 246 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 134 164 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 367 400 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 100 129 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 332 363 IPR002110 GO:0005515
Prci4g2096 664 SMART ANK_2a 284 324 IPR002110 GO:0005515
Prci4g2096 664 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 399 - -
Prci4g2096 664 Pfam Ankyrin repeats (3 copies) 188 272 IPR002110 GO:0005515
Prci4g2096 664 Gene3D - 12 410 IPR036770 -
Prci4g2096 664 SUPERFAMILY Ankyrin repeat 105 389 IPR036770 -
Prci4g2096 664 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Prci4g2096 664 ProSiteProfiles Ankyrin repeat profile. 250 271 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2096 Prci-Chr4 32564743 32568285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2096 105 374 Miscellaneous Gene Families AT2G31820 32.000 1.10e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2096 - - gmx:100791999 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2096 4 32564743 32568285 Prci4g2096 4 32564743 32568285 ECH