Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1075 ATGGGAGTGTTCACTTACCAGAACGATAACGCCTCAACTGTGGCCACTTCCAGACTTTACAAAGCTCTGGTCGTTGATTTCGACAACCTCGTCCCAAAGATCATGGAAGGCGTCACCATTGAAATCCTCGAAGGGAATGGAGGACCTGGCACTCTCAAGAAGCTCACTTACCCCAGAGGTGAGGAAACAAAGTATTTGGTGCAGAAAGTGGAAGCAGTGGATGAAGCAAGCTATGCATATAACTACAGTATGATTGAAGGGAGTGGATTAGCAGAGGGAGTGGAGAAGATGACATTTGAGACCAAGTTAGTGGAAGGAGCTGATGGAGGATCTGTAGGCAAAGTCAGTATCACTTACTTCACCAAAACCGATGCTCCTCCAAGTGATGAAGAACTCGCTAATGGAAAAGCCAGTGGTGATGGCCTCTTCAGGGCTGTTGAGGCTTACCTTCTCGCTCATCCTGATCACTACAACTAA 477 0.4717 MGVFTYQNDNASTVATSRLYKALVVDFDNLVPKIMEGVTIEILEGNGGPGTLKKLTYPRGEETKYLVQKVEAVDEASYAYNYSMIEGSGLAEGVEKMTFETKLVEGADGGSVGKVSITYFTKTDAPPSDEELANGKASGDGLFRAVEAYLLAHPDHYN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1075 158 CDD Bet_v1-like 4 150 - -
Prci4g1075 158 SUPERFAMILY Bet v1-like 2 156 - -
Prci4g1075 158 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Prci4g1075 158 FunFam Major pollen allergen Bet v 1-A 1 157 - -
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 48 57 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 87 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Prci4g1075 158 Gene3D - 2 157 IPR023393 -
Prci4g1075 158 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1075 Prci-Chr4 8246957 8247994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1075 - - gmx:100527201 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1075 4 8246957 8247994 Prci4g1075 4 8246957 8247994 ECH