Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1056 ATGGTGGGGCGCGACATCGACGATCTGCCAAAGAACGCGGCGAACTACACCGCTTTGACGCCGTTGTGGTTTCTAGAAAGAGCAGCTCAGGTGCATCCCGCCAGAAGATCGGTGGTCCATGGATCCCGCCACTACACCTGGCTTCAGACGTACCAGCGTTGCCGCCGATTGGCCTCTGCTCTTTCTCTGCGTTCCATCGGTGTCGGCTCCACGGTAGCAGTTATAGCACCCAACATTCCTGCCCTCTATGAAGCTCACTTTGGAATTCCCATGGCAGGAGCTGTACTGAATCCTGTTAACATTCGACTAAATGCATCAACAATAGCTTTTCTTCTAGGTCATTCAGCTGCAGCAGTTGTAATGGTTGATCAAGAGTTCTTTTCCTTGGCAGAGGAAGCTTTGAAAATCTGGTCTGAGAAAAGCAAAAATTTTAAGCCTCCAATTTTAATAGTCATTGGTGATGAAAATTGTGATCCCAAGGCATTCAGGTATGGTTTGGCCAAAGGAGCTATCGACTATGAGAAATTTCTAGAAAGTGGTGACCCTGAATATGCTTGGAAACCTCCAGAGGATGAGTGGCAGAGCATTGCTTTGGGTTATACATCTGGAACTACTGCTAGTCCTAAGGGTGTGGTATTACATCACCGAGGGGCATATCTCATGTCTCTAAGTGGAGCTCTCATTTGGGGAATGAATGAAGGAGCTATTTATCTATGGACTCTACCCATGTTTCATTGCAATGGTTGGTGCTACGCTTGGACACTTGCTGCTCTCTGCGGGACAAATATATGCCTTCGCCAGGTTACAGCAAGGGCAGTATATGAAGCCATTGCCAAGTATAAAGTGACGCATTTTTGTGCAGCACCAGTGGTACTCAACTCAATAGTTAATGCCCGACCTGAGGAAACCATTCTTCCTCTTCCCCATGTTGTGAATGTGAATACAGCAGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGCCATGGCACAGCGAGGATTTCGTGTCACTCACACTTATGGTCTCTCAGAAACCTACGGCCCCTCCACAGTATGTGTCTGGAAGCCGGAGTGGGAATCGCTTCCCCCCGAAACACAAGCCCGGCTCCATGCAAGGCAAGGCGTTCGCTACATAGCTTTGGAAGGTCTTGATGTTATAAACCCGAAAACGATGCAACCTGTTCCTGCTAATGGAACTACCATAGGAGAGATTATGATGAGAGGTAATGCTGTGATGAAAGGCTACTTGAAGAACCCGAAAGCCAACGAAGAAACCTTTGCTAACGGATGGTTTCACTCGGGGGATCTTGCTGTGAAGCACCCTGATGGATACATAGAAATCAAAGACAGGTCAAAGGATATCATCATCTCCGGGGCTGAAAATATCAGTAGTGTTGAAATTGAGAATACTCTGTACTCTCACCCTGCAATACTTGAGGCTTCAGTGGTGGCAAGGCCAGATGAGAAATGGGGCGAGTCTCCTTGCGCGTTCGTGACATTAAAGCCGGACGTGGATAGTTCCAATGAGCAGCGTCTTGCTGAAGATATAATGAAGTTCTGTAGAGAAAAGATGCCTGCTTATTGGATTCCCAAATCAGTGTTCTTTGGACCATTACCAAAGACAGCCACTGGGAAGATTCAGAAGCATATATTGAGGGCCAGGGCAAAGGAGATGGGTCCACTCAAGTTGAGCAAGTTGTAA 1698 0.4753 MVGRDIDDLPKNAANYTALTPLWFLERAAQVHPARRSVVHGSRHYTWLQTYQRCRRLASALSLRSIGVGSTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTIAFLLGHSAAAVVMVDQEFFSLAEEALKIWSEKSKNFKPPILIVIGDENCDPKAFRYGLAKGAIDYEKFLESGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAIYLWTLPMFHCNGWCYAWTLAALCGTNICLRQVTARAVYEAIAKYKVTHFCAAPVVLNSIVNARPEETILPLPHVVNVNTAGAAPPPSVLSAMAQRGFRVTHTYGLSETYGPSTVCVWKPEWESLPPETQARLHARQGVRYIALEGLDVINPKTMQPVPANGTTIGEIMMRGNAVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEASVVARPDEKWGESPCAFVTLKPDVDSSNEQRLAEDIMKFCREKMPAYWIPKSVFFGPLPKTATGKIQKHILRARAKEMGPLKLSKL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1056 565 Pfam AMP-binding enzyme C-terminal domain 465 544 IPR025110 -
Prci4g1056 565 CDD ttLC_FACS_AEE21_like 16 552 - -
Prci4g1056 565 SUPERFAMILY Acetyl-CoA synthetase-like 13 556 - -
Prci4g1056 565 FunFam 2,3-dihydroxybenzoate-AMP ligase 451 558 - -
Prci4g1056 565 Gene3D - 5 451 IPR042099 -
Prci4g1056 565 FunFam Long-chain-fatty-acid--CoA ligase FadD 6 451 - -
Prci4g1056 565 Pfam AMP-binding enzyme 25 456 IPR000873 -
Prci4g1056 565 Gene3D - 452 558 IPR045851 -
Prci4g1056 565 PANTHER ACYL-ACTIVATING ENZYME 10 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1056 Prci-Chr4 8040737 8044937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1056 4 565 Miscellaneous Gene Families AT3G16910 75.666 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1056 K01913 - gmx:100808187 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1056 4 8040737 8044937 Prci4g1056 4 8040737 8044937 ECH