Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0977 ATGGCGATGTCTCTGGCTCAGCAATTCGCCGGCCTCCGCTGCTGCTCTCCTCTCTCTTCGTCACCTCTTTCCAAGCCTCTCTCTTCCCCCACTACCCATAAGCGCAATCCCCTTCCCATCGTCGCCTCCGTCGCAATCTCTAATGCGCAGACCAAAGAGAGGGAAAAGCTCAAACAGCTCTTCGAAGAAGCCTACGAGCGCTGTCGAACTGCCCCCATGGAAGGCGTTTCCTTCACCGTCGAAGAGTTCAACGCCGCCCTTGATAAGTATGACTTCGATTCTGAAATTGGCACCAAGGTTAAAGGCACTGTTTTCAATGTAGATGCTAATGGAGCTCTTGTTGACATTACTGCAAAGTCGTCGGCATACTTGCCTCTCCAAGAGGCATGCATCCACAGAATTAAACATGTACAAGAAGCAGGCATAGTTCCTGGCTTGACAGAAGAGTTTGTAATCATCGGTGAAAATGAAGCTGACGACAGCTTGATCTTGAGTTTAAGGAGTCTCCAATATGACCTTGCATGGGAACGCTGTAGGCAACTTCAAGCAGAAGATGTTGTTGTCAAGGGTAAGATTGTCGGTGCAAACAAAGGTGGAGTTGTGGCTTTGGTTGAAGGCCTGAGAGGGTTTGTTCCTTTCTCACAAATATCATCGAAATCAACTGCAGAAGAGCTTCTTGAGAAGGAGCTTCCTCTGAAGTTTGTGGAGGTGGATGAGGAACAGTCTAGACTTATTCTCAGTAACCGCAAGGCCATGGCTGACAGCCAGGCACAGCTAGGAATTGGATCAGTGGTCACTGGCTCTGTTCAAAGCCTAAAGCCTTATGGTGCCTTCATTGACATTGGTGGAATCAATGGCCTACTTCATGTCAGTCAGATCAGTCATGATCGTGTAACTGATATCTCAACTGTTCTTCAACCTGGTGATACTCTCAAGGTAATGATCTTAAGTCATGATCGGGAGAGAGGTCGAGTAAGCCTTTCTACAAAGAAGTTAGAACCCACACCTGGAGACATGATTCGCAACCCAAAGCTTGTCTTTGAGAAGGCTGAGGAGATGGCTCAGACATTTAGACAGAGAATAGCCCAAGCTGAAGCTATGGCTCGTGCAGACATGCTTAGATTCCAGCCTGAGAGTGGATTAACTCTCAGCAGTGATGGGATATTGGGGCCGCTTACTTCAGACCTGCCTGCAGAGGGATTGGATCTGAGTGAAGTACCCCCAGCCGACGAATCAGAATCAGAATAA 1248 0.4808 MAMSLAQQFAGLRCCSPLSSSPLSKPLSSPTTHKRNPLPIVASVAISNAQTKEREKLKQLFEEAYERCRTAPMEGVSFTVEEFNAALDKYDFDSEIGTKVKGTVFNVDANGALVDITAKSSAYLPLQEACIHRIKHVQEAGIVPGLTEEFVIIGENEADDSLILSLRSLQYDLAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSTAEELLEKELPLKFVEVDEEQSRLILSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSEVPPADESESE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0977 415 PRINTS Ribosomal protein S1 signature 97 115 IPR035104 -
Prci4g0977 415 PRINTS Ribosomal protein S1 signature 206 223 IPR035104 -
Prci4g0977 415 PRINTS Ribosomal protein S1 signature 188 204 IPR035104 -
Prci4g0977 415 PRINTS Ribosomal protein S1 signature 115 129 IPR035104 -
Prci4g0977 415 SMART S1_6 260 330 IPR022967 -
Prci4g0977 415 SMART S1_6 95 167 IPR022967 -
Prci4g0977 415 SMART S1_6 183 249 IPR022967 -
Prci4g0977 415 ProSiteProfiles S1 domain profile. 262 330 IPR003029 GO:0003676
Prci4g0977 415 Coils Coil 347 367 - -
Prci4g0977 415 CDD S1_RPS1_repeat_hs4 262 330 - -
Prci4g0977 415 ProSiteProfiles S1 domain profile. 97 167 IPR003029 GO:0003676
Prci4g0977 415 CDD S1_RPS1_repeat_ec2_hs2 185 249 - -
Prci4g0977 415 CDD S1_RPS1_repeat_ec1_hs1 97 167 - -
Prci4g0977 415 SUPERFAMILY Nucleic acid-binding proteins 92 192 IPR012340 -
Prci4g0977 415 FunFam 30S ribosomal protein S1 258 337 - -
Prci4g0977 415 SUPERFAMILY Nucleic acid-binding proteins 180 253 IPR012340 -
Prci4g0977 415 MobiDBLite consensus disorder prediction 384 415 - -
Prci4g0977 415 FunFam 30S ribosomal protein S1 81 178 - -
Prci4g0977 415 SUPERFAMILY Nucleic acid-binding proteins 261 340 IPR012340 -
Prci4g0977 415 Gene3D - 80 177 IPR012340 -
Prci4g0977 415 Pfam S1 RNA binding domain 261 330 IPR003029 GO:0003676
Prci4g0977 415 Pfam S1 RNA binding domain 183 247 IPR003029 GO:0003676
Prci4g0977 415 Gene3D - 178 256 IPR012340 -
Prci4g0977 415 PANTHER 30S RIBOSOMAL PROTEIN S1 48 399 - -
Prci4g0977 415 Gene3D - 257 334 IPR012340 -
Prci4g0977 415 ProSiteProfiles S1 domain profile. 185 249 IPR003029 GO:0003676
Prci4g0977 415 FunFam 30S ribosomal protein S1, chloroplastic 179 255 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0977 K02945 - qsa:O6P43_021900 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0977 4 7277244 7281394 Prci4g0977 4 7277244 7281394 ECH