Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0219 ATGAAGGCAACTAAAAGTGGGGCTCTCCTTTTTCTTGCTCTGTTATTGCTGAATCAGCTTGTTGTAAACGGGGATGAGTCCAATACCAAGACTCTGGTGAAGTATGTGAAGGGGAAGAAGCTTTGTGACAAAGGGTGGGAATGCAGGGGATGGTCCAAATTCTGTTGTAATCTGACTATCACTGATTACTTCCAGACCTACCAGTTTGAGAATCTCTTTTCCAAGCGTAATTCGCCTGTGGCACACGCGGTAGGTTTCTGGGACTATCATTCTTTCATCACTGCTGCTGCACTTTTTGAGCCATTGGGCTTCGGCACCACCGGCAACAAGACCACGCAGATGAAGGAAATGGCTGCTTTCCTGGGTCACGTCGGCAGTAAAACTTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTGGCCTGGGGTCTTTGTTACAATCATGAAATGAGTCCTAGTCAGTCATACTGTGATGACTATTTCAAGTACACCTACCCTTGTGCCCCCGGTGCCCAATATTATGGACGTGGTGCCCTACCTCTCTTCTGGAACTACAACTATGGTGCTGCTGGAGAAGCTTTGAAGGTAGATTTACTAAGTCATCCAGAATACATAGAGCAGAATGCAACCCTAGCCTTCCAGGCTGCAATTTGGAGGTGGATGACCCCAATCAAGAAGATGCAACCTTCAGCCCATGATGCCTTCGTTGGCAACTGGAAGCCTACCAAGAATGACACATTGGAGCATCGAATTCCTGGTTTTGGCACTACAATGAACATTTTATATGGTGATGGTGTATGTGGGAAAGGCGATGACGACTCCATGAACAACATCATTTCCCATTACTTATATTATCTTGACCTGCTGGGTGTGGGCCGTGAGGAGGCAGGGCCTCATGAATTGCTTAGTTGTGCGGAGCAGGTTCCTTTCAACCCATCAGCTCCTACCGCTGCCGCATCTTCTTGA 966 0.4772 MKATKSGALLFLALLLLNQLVVNGDESNTKTLVKYVKGKKLCDKGWECRGWSKFCCNLTITDYFQTYQFENLFSKRNSPVAHAVGFWDYHSFITAAALFEPLGFGTTGNKTTQMKEMAAFLGHVGSKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDYFKYTYPCAPGAQYYGRGALPLFWNYNYGAAGEALKVDLLSHPEYIEQNATLAFQAAIWRWMTPIKKMQPSAHDAFVGNWKPTKNDTLEHRIPGFGTTMNILYGDGVCGKGDDDSMNNIISHYLYYLDLLGVGREEAGPHELLSCAEQVPFNPSAPTAAASS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0219 321 Gene3D Endochitinase, domain 2 148 207 - -
Prci4g0219 321 Gene3D - 68 310 - -
Prci4g0219 321 FunFam Endochitinase (Chitinase) 148 207 - -
Prci4g0219 321 Pfam Chitinase class I 68 294 IPR000726 GO:0004568|GO:0006032|GO:0016998
Prci4g0219 321 SUPERFAMILY Lysozyme-like 60 311 IPR023346 -
Prci4g0219 321 PIRSF Endochitinase 1 311 IPR016283 GO:0004568|GO:0005975
Prci4g0219 321 CDD chitinase_GH19 68 291 - -
Prci4g0219 321 PANTHER CHITINASE-RELATED 12 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0219 Prci-Chr4 1488223 1491347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0219 1 313 Glycoside Hydrolase AT1G05850 73.651 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0219 - - gmx:100811072 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0219 4 1488223 1491347 Prci4g0219 4 1488223 1491347 ECH