Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0198 ATGGCTGTATGTGGGTGTATATCTACGGTTAACATGAATTGGCAGAGTGATATAAAGGGAACGAGAGGTATAGGACCTCCCCCAGGATTTGGTTATAGGAACACATCAAGCCAAAAAATTTCGTTAGCTTTTGGAGGAAGCGAGTCCATGGGTCTTAGATTGAGACTTCCTTGCTCACGCCTTGTTAAAAGCAGTTTGAGGAATTATGGCTTGCAGGTAGTTTGCGTAGACTGTCCAAGGCCAGAGCTTGAAAATACAGTTAATTTCTTAGAAGCAGCTTACTTGTCTTCAACATTTCGCACTTCGTCACGTCCAACCAAACCATTAGAGGTTATTATTGCGGGTGCAGGGTTAGCTGGTTTGTCGACTGCTAAATATTTGGCAGATGCTGGTCATAAACCTATACTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCCTGGAAAGATGAAGATGGTGACTGGTATGAGACTGGCCTACACATATTCTTTGGGGCATACCCCAATGTTCAGAATCTATTTGGAGAACTGGGTATTAATGATCGTTTACAGTGGAAGAAGCATTCTATGATTTTTGCTATGCCAAACATGCCTGGACAGTTCAGCCGATTTGATTTTCCTGAAGTCCTGCCTGCTCCTTTAAATGGAATATGGGCAATATTGAGGAACAATGAGATGCTGACCTGGCCCGAGAAAGTCAAGTTTGCTTTTGGATTGCTGCCAGCTATTCTTGGTGGGCAAGATTATGTTGAGGCTCAAGATGTTTTGTCTGTTCAAGAGTGGATGAGAAAACAGGGTGTACCTGATCGAGTAACTGATGAGGTGTTCATAGCAATGTCAAAAGCCCTAAACTTCATCAACCCTGACGAACTTTCAATGCAGTGTATCTTGATAGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAAATGGCCTTTTTGGATGGGAATCCTCCAGAAAGACTTTGTATGCCAATTGTTGATCATATTCAATCCTTGGGTGGTGAAGTTCATCTGAATTCTCGCATTCAAAAAATTGAGCTGAATGATGAAGGGACTGTAAAGAACTTGTTATTAAATAATGGGAAGGTGATTGATGGGGATGCTTATGTGTTCGCGACTCCAGTTGATATCTTGAAGCTTCTTCTGCCAAGCGACTGGAAAGAAATTCCATATTTTAAGAAATTGGAGAAACTGGTTGGAGTTCCAGTCATAAATGTTCACATATGGTTTGATAGAAAACTGAAGAACACATATGATCACCTACTCTTTAGCAGAAGTCCCCTCCTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAGCCCAAACCAATCTATGCTGGAGTTAGTTTTTGCACCAGCTGAAGAATGGATTTCACGCAGTGATGAAGATATTATTGAGGCTACAATGAAGGAACTTTCCAAACTATTTCCGGATGAAATTTCTGCAGACCAAAGCAAAGCGAAGATCATCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTATAAAACTGTTCCAAATTGCGAGCCTTGCCGTCCTGTACAAAGATCTCCAATAGAGGGTTTTTATTTAGCTGGTGATTATACAAAACAAAAGTATTTAGCTTCAATGGAAGGTGCTGTTCTTTCCGGAAAGCTCTGTGCGCAGGCTATTGTACAGGATTCTGAGCTGCTTGTTGCTCGGGGGCAGAGAAGGAGGGTTCAAGCAAGTGTTTGA 1740 0.4155 MAVCGCISTVNMNWQSDIKGTRGIGPPPGFGYRNTSSQKISLAFGGSESMGLRLRLPCSRLVKSSLRNYGLQVVCVDCPRPELENTVNFLEAAYLSSTFRTSSRPTKPLEVIIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKKHSMIFAMPNMPGQFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVKFAFGLLPAILGGQDYVEAQDVLSVQEWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIQKIELNDEGTVKNLLLNNGKVIDGDAYVFATPVDILKLLLPSDWKEIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDEDIIEATMKELSKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLVARGQRRRVQASV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0198 579 PRINTS Flavin-containing amine oxidase signature 110 129 IPR001613 GO:0016491
Prci4g0198 579 PRINTS Flavin-containing amine oxidase signature 541 558 IPR001613 GO:0016491
Prci4g0198 579 SUPERFAMILY FAD/NAD(P)-binding domain 107 561 IPR036188 -
Prci4g0198 579 Gene3D - 106 568 IPR036188 -
Prci4g0198 579 PANTHER PROTOPORPHYRINOGEN OXIDASE 99 567 - -
Prci4g0198 579 NCBIfam 15-cis-phytoene desaturase 111 560 IPR014102 GO:0016117|GO:0016166
Prci4g0198 579 Pfam Flavin containing amine oxidoreductase 118 559 IPR002937 GO:0016491
Prci4g0198 579 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 106 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0198 Prci-Chr4 1340200 1361911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0198 K02293 - qsa:O6P43_002569 987.252