Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0118 ATGGTGAAGAAGCGGGTTCCCGACTGGCTCAACAGTTCCCTCTGGTCCTCCGCTCCTTCCTCAGATGACCACCGTGATCTCCGCCACTCCACCACCACACCCACCGACACCTACGCCAATGAAGAGCGAGAGCCCTCCGCGGTGGACCCACCTTTACCTGCGCCTTCTCCCCCTTCACCACCTATCATGGAAGATCCTCCGCACCCTCAGAGAATCGATGATTCAAGAACTATTCATCTTGCCAACGATCACAATGGCACTTCTTCTACTCCTTCAACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGCTATCGAGAAAGGTGATAGATATGAGGGAACTGCGGAGAATCGCATGTCAAGGTATACCTGATGGTGCTGGGATACGTTGTACCGTATGGAAGCTTTTGCTTGGATATCTTCCACTGGATCGAGGTCTTTGGTCATCTGAATTAGCTAAGAAGAGGTCTCAATATAAACATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTACAAGTGACCCTTCTGATGCAAAGTGTGGGAATCGGGGCTTGCTCTCTAGATCTGAAGTCACTCATGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACGGAGATAATAGATCAAATTGATCGAGATGTAAAGCGCACTCATCCAGATATGAATTTTTTTTCTGGTGATTCACAGTTTGCAAAATCAAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCAGGCGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTTTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATACAGCCTTTGTTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTGTTAAGTGGATTCAGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATCCGTTCCACTATTGCTCGATTATCACAGCTTCTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATTACAACCAAAGTCAATCCCCAATTCTATGCGTTTAGGTGGATTACACTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACTCTTCTAAGTGATCCTGAAGGTCCACAGGAGACTCTGTTACGGATATGCTGTGCAATGCTAATTCTTGTTCGGAGACGTCTCCTAGCCGGTGATTTCACGTCCAATCTCAAGTTGCTGCAGAATTATCCATCTACAAACATTAGCCATTTGCTCTATGTTGCTAATAAGTTGCGTGTACAAGGAGTCTAA 1350 0.4422 MVKKRVPDWLNSSLWSSAPSSDDHRDLRHSTTTPTDTYANEEREPSAVDPPLPAPSPPSPPIMEDPPHPQRIDDSRTIHLANDHNGTSSTPSTDDISRQAQLLAELSRKVIDMRELRRIACQGIPDGAGIRCTVWKLLLGYLPLDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMYSSTSDPSDAKCGNRGLLSRSEVTHGEHPLSLGKTSIWNQFFQDTEIIDQIDRDVKRTHPDMNFFSGDSQFAKSNQEALKNILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDSDEENTAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRVQGV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0118 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 211 320 - -
Prci4g0118 449 MobiDBLite consensus disorder prediction 48 66 - -
Prci4g0118 449 SMART tbc_4 120 418 IPR000195 -
Prci4g0118 449 MobiDBLite consensus disorder prediction 1 74 - -
Prci4g0118 449 FunFam TBC1 domain family member 13 327 448 - -
Prci4g0118 449 Pfam Rab-GTPase-TBC domain 222 413 IPR000195 -
Prci4g0118 449 FunFam TBC1 domain family member 13 209 320 - -
Prci4g0118 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 93 427 - -
Prci4g0118 449 Gene3D - 328 448 - -
Prci4g0118 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 104 351 IPR035969 -
Prci4g0118 449 ProSiteProfiles TBC/rab GAP domain profile. 125 392 IPR000195 -
Prci4g0118 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 329 446 IPR035969 -
Prci4g0118 449 Gene3D - 95 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0118 Prci-Chr4 760888 765758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0118 K24796 - qsa:O6P43_003797 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0118 4 760888 765758 Prci4g0118 4 760888 765758 ECH