Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1494 ATGGATGAAAAAAGATTGAATATTGAAGCCCCTCTTCTGTCAGTGAGACGTTCTGCCGCATCGCAGAAAACATCGGACCAAAAACACATTCTTCTGTACCCTAAATCAGACTCGACTATGCATCAACGAACAGAACCTGTTGCTGTTCCCTTCAATTGGGAAAACATCCTCGGAAGATCCAAGTCGAAGGAGCCTCCTGTCACTCCAACTCCAACGTTTAACAAAGAAACAGAAGATGAGAGAAGAGGGTCCAAGGGGAATGATATTGATAATGCTTATTCTGATGCCCTTGATACAATGTCGCCTCCAGAATCCGTCTTAATGAGCTGTGGTGTAAGCGGGATGAGTGGGTTAGAATTAGACAATTCGAATGCGAACAAGTCTGGAACATTTCATACGGATCAGAAAAATAGAGACTTCATGATGAACCGGTTCTTGCCTGCAGCTAAAGCAATGACTTTGCAGGTTCCAGAATTTGCTTCAAGGATGCAATCTGTGGTGATGGAACAGGCTAGAGAAGTTAACAGGTCGTTTCGTGAGCAAAAGAAGCTGCTGCTTAAGAATTATATCTCTGATATTATACAAAGTTCTAACCAGTGTGAAACTGAAGAAGAAAGTGAAGATGATAAACATGACTCTGCAAATGCTTCAGCCAAAGGTTGCGGGCTACTTCCCCAATTACACATTAAGAATTCTCTGTGCTTGCTAAATCCTGTGCCTGGCATGAAATTGAGGAACATAGTTCCCATGTCTTCTTCTGCCTATGAGGTTGCTAAACCAAACAAAGGCTCTCATGTTCGATCTTATAGCCCAGCTCCTGTAGTTAAAAAGGCCATTGATGCCATTTATAAGAACAAGTCGAGCTCTGAAGCTGCATCAATGGACATAAGGGAGGTGAGGAAGAAGTGGATGAGTCAATCATGTAGGTTCACTTATAACTCAGGAGAATCGCAGCAGCAAGAAAGGTTGTCTCCATTCCGGCGTTCAAGAGCCGCTGCTGCTGGCGTGTCTCCTTGTCGAAGTAGACCTCAATATCTACTTCGTGGAGCAAAGGTGCTTTCTGATTTTAGAGAAGCTGAGAATATAAGTCGGTCTAACAGATATTTGAATTTCCAGAGCAGAAGTCATGGAATTGGAAACAATCAAGAAAATAATTCAACAGTTGAGAAGACATTGTATATAGATTCTGCAAGTACGGTAAAATTAAAACAGTCATCTTCTTCACATTCATTTTCTCCAGAATCTTGTCCACATGGAAGACAACTTCAAGGTTTGGAAGAAAAGAACATGTTGGATTCAGATATCACCAACAAGCAAATTGTAATAGCTGATGGTTATTCAGAAAATGATGTTGGTGAGTCTGTCTTGTGTCCTCTTCCACCACCGTTACCAAAATCGCCCTCTGAGTCATGGCTCTGGCGCGCCCTGCCTTTAGTTTCAGTAAGGAACCCATTGCACCATTCAAATTTAAGCACTCATTCCCAATCTATAAGCCAGGATTCTCATACAACACCCGGTAATAATACCAAGTGGGAGACAATAGTAAAAACCTCGAAGTTGCATGATGATCATGTGCGCTATTCTCAGGAAATAATAACCACCCACAGATCTCAGCGTTTAAAATCTTAA 1629 0.4187 MDEKRLNIEAPLLSVRRSAASQKTSDQKHILLYPKSDSTMHQRTEPVAVPFNWENILGRSKSKEPPVTPTPTFNKETEDERRGSKGNDIDNAYSDALDTMSPPESVLMSCGVSGMSGLELDNSNANKSGTFHTDQKNRDFMMNRFLPAAKAMTLQVPEFASRMQSVVMEQAREVNRSFREQKKLLLKNYISDIIQSSNQCETEEESEDDKHDSANASAKGCGLLPQLHIKNSLCLLNPVPGMKLRNIVPMSSSAYEVAKPNKGSHVRSYSPAPVVKKAIDAIYKNKSSSEAASMDIREVRKKWMSQSCRFTYNSGESQQQERLSPFRRSRAAAAGVSPCRSRPQYLLRGAKVLSDFREAENISRSNRYLNFQSRSHGIGNNQENNSTVEKTLYIDSASTVKLKQSSSSHSFSPESCPHGRQLQGLEEKNMLDSDITNKQIVIADGYSENDVGESVLCPLPPPLPKSPSESWLWRALPLVSVRNPLHHSNLSTHSQSISQDSHTTPGNNTKWETIVKTSKLHDDHVRYSQEIITTHRSQRLKS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1494 542 MobiDBLite consensus disorder prediction 17 36 - -
Prci3g1494 542 Coils Coil 168 188 - -
Prci3g1494 542 Pfam Protein of unknown function (DUF688) 1 414 IPR007789 -
Prci3g1494 542 MobiDBLite consensus disorder prediction 58 100 - -
Prci3g1494 542 MobiDBLite consensus disorder prediction 489 509 - -
Prci3g1494 542 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 1 531 - -
Prci3g1494 542 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1494 Prci-Chr3 24773213 24776467 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1494 - - pcin:129306552 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1494 3 24773213 24776467 Prci3g1494 3 24773213 24776467 ECH
Prci3g1494 3 24773213 24776467 Prci6g0989 6 6871946 6872691 ECH