Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1003 ATGGATATGCACATTGCGGATTCAGACTGGGAGACTTTCAGTGAGAGCAGCAGCATTGAGGATCAAGAGGAAATTGATTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCAGTTTAGAGGAAAGCATTGGGAGAATTGATGATTTCCTCTCATTTGAGAGGGCGTTTGTTCATGGGGATGTGGTTTGCTCCTTGTCTGACCCATCTGGACAGATGGGCAGGATTACAGGCGTTGATGTGTTTGTGGATTTGGAAAGTGTGTGTGGAAAACTATTAAAAAATGTAAACTCCAAGAGGCTTCTAAAAATTCGCTCCATTTCAGAAGGTGATCATGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAACAGGTGGTGGACAAAGTAACTGTGTTATTTGATGATGGAGCTAAATGTGAGGTCACCATGTTGGAGAAAGATAAGATCTTGCCTCTGACTCGTAATTTACTTGAAGACTTGCAGTACCCATACTATCCAGGGCAGAGAGTAAGGATTAGTTCCTCAACTTCTTCTAAGTCAGCTAGGTGGTTATGTGGAACTTGGAGAGACAGTCAAGATGAAGGAACCGTTTGTTCTGTTGAAGCAGATTTAGTATATGTTAACTGGCTTGCATTTGTTCCCATGGGTCCTGATTTTACTGTAAATGCACCCCCATGCTGGCAAGATTCCAAAAACTTGACCTTGCTGTCATGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTACAGTGGCAGACCCTAAGGAACAGATGGAACAGAACTTCAGAAACACTTCTACTTGGGGTCTTACTAAGGAGCACATTATGGCAGGAGGATATAAAAATGGAAACATTAACTTCAATATTGGGGAACTTTTTGTAATTGGGAAAATAAGGACCAAAGTTGATGTTGTATGGCAGGATGGTGAGCACACTTTGGGATCAGATCCCCATACTTTACTCCCGGTGAATGTCATAGACACTCATGAATTCTGGCCTCAGCAGTTTGTGCTGGAAAAAGGTACTGCTGATGATCATCCTAAGCCCAGCAGTCAAAGGTGGGGAGTTGTTCAATTTATGAATGCAAAAGAGCGTACTATAAAGGTACAATGGAATACTGTTTCCATATCTGAGCCAGAGAATTTGGCTGGAGATAGGATGGAGGAAACTGTGAGTGCCTATGAAATCATAGAGCATCCAGACTACTCCTATTGTTTTGGTGATATTGTATTCAAGGCGGCTCAAAAGCAGCTTGGTTACCAAGCTGAGAAAGATCAAGCAAAGTCAACAACTGACTTGAATGTGGAGGCTGCTCTTATAGACAGGAGCCACATCAGTTATCAGAATGAGTTCCCTGATGACTGTTACCTGTCCTGTATTGGCAATGTTATTGGTTTCAAAGATGGTTTTGTAGAGGTGAAATGGGCTACTGGTTTAGCAACCAAGGTTGCACCTCATGAAATTTTTCGAATTGACAAGCATGAAGGTTCAACTGAAACTCCTGTTCCTTATGAAGCAGATATTGAGGAGTTGACTCAAGAGATGTCGGAAATTGGAAATCTAACTTCTGACAGAAAGGGAAAGGGCTTGTTAGATTTGGCCGGTGATAGAGTGCATTGTGAAAGGCATCCAGGGGAATGTAGTACCTTTTCCCTTCCCCGAGCTGCCATTGAAATTTTCTCCAGCATTAAGGCCAGCATTTTTCAAACATTTGGTGTAACATCACTTTCACGAGCAGTTTCTTTAGTCCCTACAACTGAGGAGGGAAATCAATCTAAAAATCTTGATAAGAAAGAAGTTTCAGAAACTTGTGAACTCTGCACTGAAGCAAATCCAATGAGTGAATTGCAGTCTACTGAAGACATAATTGCAGATAGGGATGTTATTAGGTTTTCAGAGAGGAAAGATCTTCTATTTTCTACTAATAGCAACAATTCAAATCGGTTTAAGCAGTTTGATATAATAGATAATTGCTCAGACCACCACTTCTTTGATGAGCGAAAAGGGTTGACATCGTCTCAGGTAAAAAGAGGGTGGGTGAAAAGGATTCAGCAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATATATGTCCGTGTGTTTGAAGAAAGAATGGATCTCCTACAAGCAGTGGTCGTTGGTGCACCAGGAACTCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTTCCTCCTGAGTATCCTAATGAACCTCCTATGGTGCACTACAATTCGGGTGGGCTCAGATTAAACCCTAATTTGTATGAATCAGGGAAAGTCTGTCTGAGCCTCCTGAATACATGGACCGGTACAGGCAGCGAAATGTGGAACCCGGGGGCCTCCACAATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGAAAAGCCTTATTTCAATGAGGCTGGATATGACCAGCAGATTGGCAGAGCCGAGGGAGAGAAGAATTCAGTGAGCTATAATGAAAATGCTTTCCTTGTCACCTGTAAATCAATGCTATATCTACTGAGAAAACCACCCAAGCATTTTGAGGCACTTGTGGAAGAGCACTTCGGCCAACGTGCACAACACATACTTCTCGCTTGTAAGGCGTATAGCGAAGGAGCTCCGATTGGATGTGCTTTCGAAAGTGTTAAAACCATGCACCAAAATCAGAAGGGAACTTCTACAGGTTTTAGAATCATGCTCGCTAAGCTCCTCCCCAAGCTTATCGAGGCTTTTTCCGGTAAAGGAATTGATTGCAGCCAGTTCGTTCAGTTGCAGAAGTAA 2793 0.4261 MDMHIADSDWETFSESSSIEDQEEIDFLYAGQARSILSSLEESIGRIDDFLSFERAFVHGDVVCSLSDPSGQMGRITGVDVFVDLESVCGKLLKNVNSKRLLKIRSISEGDHVIKGPWLGRVQQVVDKVTVLFDDGAKCEVTMLEKDKILPLTRNLLEDLQYPYYPGQRVRISSSTSSKSARWLCGTWRDSQDEGTVCSVEADLVYVNWLAFVPMGPDFTVNAPPCWQDSKNLTLLSCFSHANWQLGDWCMLTVADPKEQMEQNFRNTSTWGLTKEHIMAGGYKNGNINFNIGELFVIGKIRTKVDVVWQDGEHTLGSDPHTLLPVNVIDTHEFWPQQFVLEKGTADDHPKPSSQRWGVVQFMNAKERTIKVQWNTVSISEPENLAGDRMEETVSAYEIIEHPDYSYCFGDIVFKAAQKQLGYQAEKDQAKSTTDLNVEAALIDRSHISYQNEFPDDCYLSCIGNVIGFKDGFVEVKWATGLATKVAPHEIFRIDKHEGSTETPVPYEADIEELTQEMSEIGNLTSDRKGKGLLDLAGDRVHCERHPGECSTFSLPRAAIEIFSSIKASIFQTFGVTSLSRAVSLVPTTEEGNQSKNLDKKEVSETCELCTEANPMSELQSTEDIIADRDVIRFSERKDLLFSTNSNNSNRFKQFDIIDNCSDHHFFDERKGLTSSQVKRGWVKRIQQEWSILERNLPETIYVRVFEERMDLLQAVVVGAPGTPYHDGLFFFDVCFPPEYPNEPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTGSEMWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFEALVEEHFGQRAQHILLACKAYSEGAPIGCAFESVKTMHQNQKGTSTGFRIMLAKLLPKLIEAFSGKGIDCSQFVQLQK 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1003 930 FunFam Probable ubiquitin-conjugating enzyme E2 23 643 919 - -
Prci3g1003 930 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 681 841 IPR000608 -
Prci3g1003 930 SMART ubc_7 684 841 - -
Prci3g1003 930 CDD UBCc 683 836 IPR000608 -
Prci3g1003 930 Pfam Ubiquitin-conjugating enzyme 685 832 IPR000608 -
Prci3g1003 930 SUPERFAMILY UBC-like 673 850 IPR016135 -
Prci3g1003 930 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 6 922 - -
Prci3g1003 930 Gene3D Ubiquitin Conjugating Enzyme 643 921 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1003 Prci-Chr3 12849988 12858135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1003 21 924 Miscellaneous Gene Families AT2G33770 50.386 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1003 K10581 - gmx:100306246 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1003 3 12849988 12858135 Prci3g1003 3 12849988 12858135 ECH