Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0905 ATGTCTTTATATTGTTCAAGCTCAGGAACAATAATCCGACGTACCATCGTGGGAAAAGGAAGAAGAAACTGCGGCTTCACTCACGTAGAAGCATCGAGCTCCTCCTTCTCCTTCCATTATAAATTTCCTCATAACTTGTCGAGGCACATTGGGTTTGTATCGAAATTCGACCAGACTTGTTCTTCTTCTTCCGTGATGGAGGAGGGCAGCAAAAACCTGGGTTTTGTGTCCGAAGCAGAGGAATATTCTAAGGAATTGGATGTTGCGGTCAGAGCGGTTCAGATGGCTTGCTCCCTCTGCTCGAAAGTGCAGGAAAATTTGATTGTTAAGTCCAAGAGTGACAGTCAGGTCCATTCCAAGGACGACAATTCTCCAGTCACTATTGCAGATTGGAGTGTCCAAGCAGTTGTCAGCTGGATATTGTCAGAGTGCTTAGGAAGTAAAAATATCTCAATTCTTGCCGAAGAAGATGTTGAAACTCTCTCCAAGACTAGTTCTTCTGGGCTGCTGGAAGCTGTGGTTAAGACTGTGAATGAATGTCTAGCTGAGGCGCCTCAATTTGGAGTTGAAGCCCCAAAATCAGCTCTTGGTGCTTCTGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCTACTGGAAGATTTTGGGCGCTCGATCCTGTTGACGGCACACTGGGGTTTGTACGTGGAGATCAATATGCCATAGCTCTTGCACTCATAGAGGATGGAGAAGTAATGCTTGGAGTTCTTGGGTGTCCTAACTACCCAATGAGAAAGGAATGGTTAACCTATTCTCATCGCTATCATCGGATTATATCCAAGCTGACTCCTCCAACATCTGAAACATGGGACAAAGGTTGTGTTCTATATGCTAGAAGGGGAAGCGGCGGGGCTTGGATGCAACCACTGGTCCAGTTTAATAAGAAGTTTGTATGGCCAAATTATGCAAAACAAGTGTCAGTTTCTTCCATTGACAATCCTTCGTTGGCAACTTTTTGTGAACCTGTTGAGAAGGCAAATTCAAGCCACTCTTTCACTGAAGGACTGGCCCATAGTGTTGGTCTCAGGAAGCAGCCATTGAGAGTGTACAGCATGGTGAAATATGCAGCGATAGCTCGTGGGGATGCCGAGGTTTTCATGAAGTTTCCAAGGTCTGGCTATAAGGAGAAGATATGGGATCACGCAGCTGGTGTTGTCATCATCCAAGAGGCAGGTGGCGTGGTGACAGATGCCAGAGGCCGACCGCTAGACTTCTCAAAAGGTGCATTTTTAGAAGGTCTTGATCGGGGAATAGTTGCTTGTGCTGGAGCCTCACTGCATGAAAAGATCATAGATGCTGTTGATGCTAGCTGGGGTTCCTCTTGCCTTTGA 1380 0.4638 MSLYCSSSGTIIRRTIVGKGRRNCGFTHVEASSSSFSFHYKFPHNLSRHIGFVSKFDQTCSSSSVMEEGSKNLGFVSEAEEYSKELDVAVRAVQMACSLCSKVQENLIVKSKSDSQVHSKDDNSPVTIADWSVQAVVSWILSECLGSKNISILAEEDVETLSKTSSSGLLEAVVKTVNECLAEAPQFGVEAPKSALGASEVLEIISRCNSVGGPTGRFWALDPVDGTLGFVRGDQYAIALALIEDGEVMLGVLGCPNYPMRKEWLTYSHRYHRIISKLTPPTSETWDKGCVLYARRGSGGAWMQPLVQFNKKFVWPNYAKQVSVSSIDNPSLATFCEPVEKANSSHSFTEGLAHSVGLRKQPLRVYSMVKYAAIARGDAEVFMKFPRSGYKEKIWDHAAGVVIIQEAGGVVTDARGRPLDFSKGAFLEGLDRGIVACAGASLHEKIIDAVDASWGSSCL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0905 459 Gene3D - 323 453 - -
Prci3g0905 459 FunFam PAP-specific phosphatase HAL2-like 323 456 - -
Prci3g0905 459 FunFam PAP-specific phosphatase HAL2-like 80 312 - -
Prci3g0905 459 Pfam Inositol monophosphatase family 122 453 IPR000760 -
Prci3g0905 459 PRINTS Inositol monophosphatase superfamily signature 392 416 IPR000760 -
Prci3g0905 459 PRINTS Inositol monophosphatase superfamily signature 219 235 IPR000760 -
Prci3g0905 459 PANTHER PHOSPHATASE 70 457 - -
Prci3g0905 459 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 82 457 IPR006239 GO:0006790|GO:0008441
Prci3g0905 459 Gene3D - 80 313 - -
Prci3g0905 459 ProSitePatterns Inositol monophosphatase family signature 2. 395 409 IPR020550 GO:0046854
Prci3g0905 459 ProSitePatterns Inositol monophosphatase family signature 1. 219 232 IPR020583 -
Prci3g0905 459 CDD PAP_phosphatase 85 450 - -
Prci3g0905 459 SUPERFAMILY Carbohydrate phosphatase 82 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0905 Prci-Chr3 11701985 11705099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0905 K01082 - gmx:100776247 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0905 3 11701985 11705099 Prci3g0905 3 11701985 11705099 CCT
Prci3g0905 3 11701985 11705099 Prci3g0905 3 11701985 11705099 ECH