Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0780 ATGGAGCTAACTGATCATAGTGTTATTATGAATGGGGAGAGTGAGGCAATGGTCAATGGACCTTCTGCAAGCATGCCTCTAAGGCGGCGCCAAATCTATCCAACGTATCCTGTTGGCTTAGTGAAGAAGACAGCTTATATATTCGATGGCCTTGGGAATTTTTTTAATAAGGAATGGGATCTAGCAGACCTTGATCAAATCACAAAAAGAGAATCAAAGCTATTAGATGGGAGAGAGAATGAGTTTTCTTGGTACCATGTGGAGCTTCCAAAAGAAAATCAAAAGCTGTCACAGTCTGCGCAGGACTTAATTGGTGTTCTTTGCCCACCTTTGAAACTCCAGGACATTCTCTCACTTGTCAGCAATGGACCCTTCTGTGCACATGTTGATGGGGCTCTTGTATTCAGGGTTAATTCACCTGGCCCTCCCACCAGTGACTTTACATTTAGGATTGCTGCTAGAGTCACAGAAAATTCAGTAATTACTGTGTCTTTGGGGCGCGTTCCCCGATTAGGTTTTTCACGCATGGGAGAGTCTCTTCTTTCTGAGATTCCTAGTGTGGAAAGCCCCCCTCATTTTGGAGATCATCAGAAGCCGGGGAATGGGACTGTGATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCATTCTGAGGAAGCTGACAATCCAGTTCCAAGATCTGTCTCAAACCTTGTAGTTCATATAATTGACACCCATGTGGATCAGCTTCAAGATCTTGTAACTAAACTTGAGATGGAGTTGGACTCTGTGGAGCTTGCCTTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTTCCCAAACTGCATCTGGACTTGCAGCGTCTCCTTCAGGTGATTTCTCATGGGGAGCAAGTATTTTTACGAGTCAGAGAAAAATGCTCTTTAAAACCATGGTTTGCCAATGAAGACATTAGCTCTCTTGAAGAATTAATTGGAAGATTAAAGAGGTTGAAGGAGAATGTTGGATTTATAGTAAATCGTGTAACAGCAATTCAAGCAGGTCTTGACAGCTGGCAGTCTGAGCAAATAAACAGGAAACTTTACTATCTTTCATTCCTTTCAATCATATTCCTTCCATTATCCATCATTACAGGAGTTTTTGGCATGAATGTTGGAGGTGTTCCATGGACAGGCCAAAACAATCCCGAGCTTAAGGATGGCTTTCGCAACGTCATCCTACTGTGTGTTGTTATGCTACTACTTGTGCTACTCTGCTTCCTTTTCCCGGCTCTGTACACTCGTATAGCCGCATGGCGGAGAAAGAATGTTCTGGGAAGAAGCTGGTCAATTAATAGGAAGTCATTTCTTAGAAGACCTCTCCACATTGGAGATCAAGGGAGAGGAGGATACCTTCGGATCTGA 1407 0.4264 MELTDHSVIMNGESEAMVNGPSASMPLRRRQIYPTYPVGLVKKTAYIFDGLGNFFNKEWDLADLDQITKRESKLLDGRENEFSWYHVELPKENQKLSQSAQDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPTSDFTFRIAARVTENSVITVSLGRVPRLGFSRMGESLLSEIPSVESPPHFGDHQKPGNGTVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHVDQLQDLVTKLEMELDSVELALDKGGFALKKQMLDDRRFPKLHLDLQRLLQVISHGEQVFLRVREKCSLKPWFANEDISSLEELIGRLKRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNNPELKDGFRNVILLCVVMLLLVLLCFLFPALYTRIAAWRRKNVLGRSWSINRKSFLRRPLHIGDQGRGGYLRI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0780 468 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 421 IPR045863 -
Prci3g0780 468 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Prci3g0780 468 Coils Coil 242 262 - -
Prci3g0780 468 Pfam CorA-like Mg2+ transporter protein 81 421 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci3g0780 468 Gene3D Magnesium transport protein CorA, transmembrane region 354 433 - -
Prci3g0780 468 SUPERFAMILY CorA soluble domain-like 48 348 IPR045861 -
Prci3g0780 468 Coils Coil 315 335 - -
Prci3g0780 468 PANTHER OS08G0130000 PROTEIN 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0780 Prci-Chr3 9965267 9969766 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0780 - - gmx:100804031 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0780 3 9965267 9969766 Prci3g0780 3 9965267 9969766 ECH