Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0356 ATGCTCAGATTGCTGCCACTGCGATCATTCCTCTTCTTAAGAACCAGAAATCCTCATTATCTTGTGAAAAGTCAGCATTTGATATCTTTGCCTGGACCATTAAGAAGAGAAGCTACAGGAGTCAGGATTAAAGTGACCACCCCTTGTCCTATCTGGCACATGGCAGGCTCAACAAGTTCTATGTCAAACACACAAGTGGCTGCAGGGGATGAATTGCAACAGGTTAAACTTCTAACATCAACCAATGACAACTATGGTGGTGTTATTGTGGAAATGGATGAGCCTATGGACCCTACAACTTTTATCTCAATTCTCAGAGCTTCAATTTCCCACTGGAAACAGCTGGGCAAGAAGGGTGTTTGGATAAAATTACCTATTGATCTGGTCAATCTTGTTGAACCTCTAGTTAAGGAAGGCTTCTGGTACCACCATGCAGAACCAAAATATCTAATGCTGGTTTACTGGATTCCTGAAAGTGCACATACTATTCCAGCAAACGCCACACATCGAGTGGGTGTTGGTGCATTTGTGATGAATGGAAAACAAGAGGTCCTGGTAGTTCGAGAAAAAAGTGGTCCACTTCGGGGAATTGGAGTCTGGAAATTCCCTACTGGAGTTGTTGATCAGGGAGAAGACATTTGTGAAGCAGCAGTGAGAGAGGTCAAAGAAGAAACAGGAGTTGATTCAGAATTTTTGGAGGTTATAGCATTCAGACAAAGTCACGAGTCATTCTTTGAAAAGTCAGATCTGTACTTTGTGTGCATGATGCGGCCACTTTCTTTCGACATCCAAATCCAAGATGTGGAATTAGAGGCTGCTCAGTGGATGCCGTTTGAGGAATATGCAGCTCAGCCATTCGTCCAGAAGCATCAATTACTGAAGTACATCAATGATATATGCTGGGAAAAGATCAACAGACAATATTCTGGATTTAATCATGTGCCTGTATCATCAGTTTTTTCTGACAAGAATAGTTATTTGTACCTCAATGCTGGAGACTTGAAGAGGTATATTTCTTCGTAA 1023 0.4184 MLRLLPLRSFLFLRTRNPHYLVKSQHLISLPGPLRREATGVRIKVTTPCPIWHMAGSTSSMSNTQVAAGDELQQVKLLTSTNDNYGGVIVEMDEPMDPTTFISILRASISHWKQLGKKGVWIKLPIDLVNLVEPLVKEGFWYHHAEPKYLMLVYWIPESAHTIPANATHRVGVGAFVMNGKQEVLVVREKSGPLRGIGVWKFPTGVVDQGEDICEAAVREVKEETGVDSEFLEVIAFRQSHESFFEKSDLYFVCMMRPLSFDIQIQDVELEAAQWMPFEEYAAQPFVQKHQLLKYINDICWEKINRQYSGFNHVPVSSVFSDKNSYLYLNAGDLKRYISS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0356 340 Gene3D - 75 160 - -
Prci3g0356 340 PRINTS NUDIX hydrolase family signature 214 229 IPR020476 -
Prci3g0356 340 PRINTS NUDIX hydrolase family signature 200 214 IPR020476 -
Prci3g0356 340 ProSitePatterns Nudix box signature. 205 226 IPR020084 GO:0016787
Prci3g0356 340 Pfam NUDIX domain 169 289 IPR000086 -
Prci3g0356 340 CDD Nudix_Hydrolase_12 169 300 - -
Prci3g0356 340 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 170 309 - -
Prci3g0356 340 SUPERFAMILY Nudix 136 302 IPR015797 -
Prci3g0356 340 PANTHER NUDIX HYDROLASE RELATED 57 335 IPR003293 -
Prci3g0356 340 ProSiteProfiles Nudix hydrolase domain profile. 168 300 IPR000086 -
Prci3g0356 340 FunFam Nudix hydrolase 8 170 308 - -
Prci3g0356 340 FunFam nudix hydrolase 2 75 161 - -
Prci3g0356 340 Pfam Nudix hydrolase domain 78 156 IPR040618 -
Prci3g0356 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 254 278 IPR003293 -
Prci3g0356 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 150 166 IPR003293 -
Prci3g0356 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 166 184 IPR003293 -
Prci3g0356 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 128 146 IPR003293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0356 Prci-Chr3 4554511 4564943 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0356 K26956 - gmx:100819062 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0356 3 4554511 4564943 Prci3g0356 3 4554511 4564943 ECH