Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2996 ATGTTGGATGGGCCCTCCTGTCCCCTGACTTGTCACGTGACCCCACTCGACACGTGTCAACCCCTCCTCCCCTCCCGTATAAAACCAACCGTCCTCACTTCGTCTCCTCCTTCAAATCACCTTGTCTCTCCGCAAATGAGCCACGACCTAGACTCCTCTTACCCTCCGCCTCTCCGCCACGTCGGCCACCGTGAAGATGACGACGAGCCTCCCGAATCCATCACCGACTCAGATCCAGTTCCAGTGCCGGTGATCGACCTTCATTGCCTGAACGACGACGTCGACAAGGACGGGGAGGAATTGCGGAAGCTAGACGAGGCTTGCAGGGAGTGGGGAATATTCCGTCTGGTGAACCACGGCGTTCCTTTAGGGCTAATGGCGGAGGTGGAGGAGCTGACAAAACGACTGTTCTGGATGTCGTTTGAGTCGAAGAAGTCGTCGTGCGAGGAAGGGCCTGTGAGTTACTTTTGGGGCACGCCTGCCCTAACTCCGTCGGGCAGTGCCCTATCGGGAGGCCATCGAAAGATCAATTTGGTGGAAGGCTTCAATCTGCCTCTAAGTCAACTGTCGGAATTTCATCCACAGCTTCCTCTGCTTCAATCCTTCAGAGTTGCAATGATAGAGTACGGAGAGCACATTTCAAGAATCGCGACTAGTTTATTCAAAGCAATGGCGAGTAAGTTAGAAGTGAAGATGGAGGAGGACAAGTCAAGCAATTGTTATGTTTCAGACAAGACAGGAAACATAAGAGTGTATCGCTATCCACGTAGCCCTAATAATCATCACGTGATTGGTTCTTGGGGAATGGAACCTCACACAGATAGCTCTGTGTTGTCCATTCTCAATCATCATACTCAAGATTCTGCACTCGAGCTTTTCAACAATCATCAATGGCTTCCTCTTCAATCCATTCCCAACACTCTCGTCGTCAACATCGGCGACATGATGCAGGCCATAAGTGATGACAGATACAAGAGTGCATTGCACAGAGTGAGGATAAGCCAAGAGAAGGAGAGGATATCAGTGTGTTACTTTGTGTTTCCAGATGAAGAGTTTGTGATAGAGAGCTCCAAGTACAAGCCCTTCAGTTACAGTGATTTCAGAGCACAAGTTCAAGAGGACATCAAAACCACTGGCTATAAAGTTGGACTCTCAAGGTTTTCCCAAACTCATCATTAG 1179 0.4953 MLDGPSCPLTCHVTPLDTCQPLLPSRIKPTVLTSSPPSNHLVSPQMSHDLDSSYPPPLRHVGHREDDDEPPESITDSDPVPVPVIDLHCLNDDVDKDGEELRKLDEACREWGIFRLVNHGVPLGLMAEVEELTKRLFWMSFESKKSSCEEGPVSYFWGTPALTPSGSALSGGHRKINLVEGFNLPLSQLSEFHPQLPLLQSFRVAMIEYGEHISRIATSLFKAMASKLEVKMEEDKSSNCYVSDKTGNIRVYRYPRSPNNHHVIGSWGMEPHTDSSVLSILNHHTQDSALELFNNHQWLPLQSIPNTLVVNIGDMMQAISDDRYKSALHRVRISQEKERISVCYFVFPDEEFVIESSKYKPFSYSDFRAQVQEDIKTTGYKVGLSRFSQTHH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2996 392 PRINTS Isopenicillin N synthase signature 308 334 - -
Prci2g2996 392 PRINTS Isopenicillin N synthase signature 104 121 - -
Prci2g2996 392 SUPERFAMILY Clavaminate synthase-like 66 372 - -
Prci2g2996 392 Gene3D - 78 381 IPR027443 -
Prci2g2996 392 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 82 369 - -
Prci2g2996 392 MobiDBLite consensus disorder prediction 30 81 - -
Prci2g2996 392 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 245 348 IPR005123 -
Prci2g2996 392 Pfam non-haem dioxygenase in morphine synthesis N-terminal 82 155 IPR026992 -
Prci2g2996 392 MobiDBLite consensus disorder prediction 30 50 - -
Prci2g2996 392 Pfam 2OG-Fe(II) oxygenase superfamily 249 348 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2996 Prci-Chr2 37383437 37392809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2996 60 345 Glycosyltransferase AT5G59530 27.333 3.47e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2996 K04125 - pcin:129298043 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2371 13 38162894 38165560 Prci2g2996 2 37383437 37392809 CCT
Prci2g2996 2 37383437 37392809 Prci2g2996 2 37383437 37392809 ECH