Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2698 ATGTTTGGGGTCATAAGGCGAAGAGTTGCTTCTGGCGGTTCGTCTCCTTTGTTTCAGAGTCTCTCATTTCAGAAAGTTCGGAAAAACCTCCCAAGTCGATTTTCTTCCATTTTGGAGAAAGAGATCGTTTGTCTTTCTGGAGGATGTCAGAAGGTTCGGAATATCTCTCATTCAAGTTCAAGTGGATGCTGGAGTAATTTAAAGTCCATGAGGGAGTTTTATTATCAAGAGGTTACCAGGCAAACATGGAGGCGCTCCTTTTCTTCAGATAATGGAGATCTGGTTGACGTTGTGGTCCCTCCATTAGCTGAATCTATAGCTGATGGCACTCTAGCAACCTTTTTGAAAAAACCAGGTGATGGTGTTAAAGTTGATGAACCAATTGCACAAATTGAGACGGATAAGGTTACAATTGATGTTACCAGTCCTGAGTCAGGCGTGATTCAGAAGCTTCTAGCCAATGAAGGGGATACTGTTGAGCCAGGTAATAAGATAGCAATCATTTCAAGGTCTGCTGAAGCCACAACTCATGTAGCCCCATCTGAAAGTGTATCTGAGAAACCTGCTCCTCAGCCAACCCAAAAGATCAAAAAGGAGGAGGCAGCACCTAAAGTTGAAGCTGCCCCTACTACGGAGAAGCCTAAAGCACCCTCTCCTCCACGGCACTCTCCCACAGAGCCACAGCTTCCCCCTAAGGAAAGAGAAAGACGAGTTCCTATGACAAGACTTAGAAAGCGGGTTGCTACTCGGTTGAAAGATTCCCAAAATACTTTCGCATTGCTGACAACATTCAATGAAGTTGACATGACTAACTTGATGAAGCTTCGTGCTGATTATAAGGATGTTTTTGTTGAAAAGCATGGAGTCAAATTGGGACTCATGTCTGGGTTTGTTAAAGCTGCAGTGAATGCACTCCAGCATCAGCCAATAGTAAATGCTGTCATTGATGGTGATGATATAATATACAGAGATTATATAGATATCAGCGTAGCTGTTGGCACTTCAAAGGGCCTTGTTGTACCCGTCATTCGCAATGCTGATAAGTTGAACTTTGCGGAAATAGAAAAGGAGATAAATAATTTTGCAAAAAAGGCTAATAATGGAACTTTATCAATTGATGAGATGGCTGGAGGCACTCTAACAATATCAAATGGCGGTGTTTATGGGAGCCTTTTGAGTACCCCTATAATCAATCCCCCTCAGTCCGCAATTTTGGGTATGCACTCTATAGTGACACGTCCAATGGTGGTTGGAGGTGAAGTAGTCCCAAGGCCAATGATGTATGTTGCTCTGACATATGATCATAGATTGATTGATGGAAGAGAGGCTGTGTTCTTTTTGCGTCGAATCAAAGATGTTATTGAGGATCCTCGCAGGCTTCTGCTCGACATATGA 1395 0.4301 MFGVIRRRVASGGSSPLFQSLSFQKVRKNLPSRFSSILEKEIVCLSGGCQKVRNISHSSSSGCWSNLKSMREFYYQEVTRQTWRRSFSSDNGDLVDVVVPPLAESIADGTLATFLKKPGDGVKVDEPIAQIETDKVTIDVTSPESGVIQKLLANEGDTVEPGNKIAIISRSAEATTHVAPSESVSEKPAPQPTQKIKKEEAAPKVEAAPTTEKPKAPSPPRHSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRADYKDVFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISVAVGTSKGLVVPVIRNADKLNFAEIEKEINNFAKKANNGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVTRPMVVGGEVVPRPMMYVALTYDHRLIDGREAVFFLRRIKDVIEDPRRLLLDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2698 464 NCBIfam dihydrolipoyllysine-residue succinyltransferase 193 463 IPR006255 GO:0004149|GO:0006099|GO:0045252
Prci2g2698 464 Gene3D - 221 460 IPR023213 -
Prci2g2698 464 MobiDBLite consensus disorder prediction 174 190 - -
Prci2g2698 464 Gene3D - 94 171 - -
Prci2g2698 464 MobiDBLite consensus disorder prediction 173 241 - -
Prci2g2698 464 SUPERFAMILY CoA-dependent acyltransferases 234 463 - -
Prci2g2698 464 Pfam Biotin-requiring enzyme 96 168 IPR000089 -
Prci2g2698 464 CDD lipoyl_domain 95 168 - -
Prci2g2698 464 ProSiteProfiles Biotinyl/lipoyl domain profile. 94 169 IPR000089 -
Prci2g2698 464 MobiDBLite consensus disorder prediction 192 206 - -
Prci2g2698 464 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 234 462 IPR001078 GO:0016746
Prci2g2698 464 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 227 462 - -
Prci2g2698 464 SUPERFAMILY Single hybrid motif 94 181 IPR011053 -
Prci2g2698 464 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 53 463 - -
Prci2g2698 464 MobiDBLite consensus disorder prediction 227 241 - -
Prci2g2698 464 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 119 148 IPR003016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2698 Prci-Chr2 25640139 25652710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2698 34 462 Acyl Lipid Metabolism Gene Families AT3G13930 28.717 7.76e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2698 K00658 - gmx:100799149 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2698 2 25640139 25652710 Prci2g2698 2 25640139 25652710 ECH