Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2554 ATGTGGGAAACCAGGAAAAGCCAGCCCGAAAAGGTTTGCTTTGTGTGTTGTGTGTTCACAGTGCCTCTCTCTCTCTCTCTCTCCCCCTCTCTCTCTCTGGCAAATCTCACGCAGAACCGGAGAACAACCCTCTTCTCAAGGCATTTATCCGGCAGAGCTCGCCGGAAGTTCAGCAACAAGGCAGCTGCAATGTGGAGTTCACGCGCTCTCTCTCCTCTGCTTACTCTGTTTATTCTTCACTCGGTGGCAGCTCTGGTCTCTGCTCAGGGATCTACAAGAACCTCCTGGAAGACACTAAGCGGAGATGCACCGTTAGTCATAGCACGTGGGGGATTTTCAGGGATATTTCCTGATTCCAGCCTAGCTGCTTACAATTTGGCTCTAATAACCAGCGTACCAAATGTCATTTCATGGTGTGATGTGCAATTAACAAAAGACAGTGCTGGGATTTGTCTTCCAGATATCAAACTTGACAATGCTTCCGATATTTCTGGCGTTTTTCAAAATAAATCCACCACTTACTTAGTTAACGGTGTACCAACCCGTGGATATTTTTCAGTGGATTACACAATAAAGGATCTATCTCAAGTTGTTTTGAGTCAGGGAGTCTACTCTCGAACTAACAAGTTTGACGGTAATGCATTTCCAATTTTTACTGTTGAGGAGTTCGTTAAACAAGTTGCCCCGCCAGTCTTGTGGTTGAACATTCAGCATGATATTTTCTACTCAAAACACAATTTGAGTATGAGAAATTTCGTACTTTCTGTTTCTAGAAAAGTAATCGTCAAGTATATCTCATCACCTGAGGTTGGTTTCCTGAGAGGTATAGCAGCACGCTTTAACCCAAACATAACTAAACTGATCTTCAGATTTATGGAACAAGATGACACAGAACCATCAACCAATCAGACTTATGGAACGCTTGGAAAAAATCTTACATTTATCAAGACATTTGCATCTGGAATTATGGTTCCCAAGATTTACATATGGCCTGTAGATGCTAGTTCTTATCTACAGCCACAGACAACTTTGGTCTTGGATGCTCACAAAGCAGGACTAGAAGTTTTTGCATCAGATTTTACTAATGACGTTCCAATTAGCTATAATTACAGTTATGATCCTCTTGCTGAGTACCTCCAGTTCATTGATAATGGTGACTTCTCTGTTGATGGTGTGCTGTCTGACTTTCCTATAACTCCATCTGAAGCTGTAGGTTGCTTTGCTCACCTAAGTGCAAATGCTGCGAAAACAGTTAACATTTCGGTTATCTCAAAATATGGGGCAAGCGGAGACTATCCTCCCTGTACTGACATGGCATACAACAAGGCCATATCAGATGGTGTGGATGTTCTTGATTGTCCTGTTCAATTGTCACAAGATGGAGTACCATTTTGCCTAAGCTCCATAGATCTCATAGAGAGCTCAACAGTTGCTCAATCAAGTTTCAGCAGACTTGCCACATCTATTCCTGAGATCAAGTCTGGCAGTGGCATATTTTCATTCAGTTTGAAATCAGCTGACATTAGTACCTTGACCCCCTCAATATTGAATCCATATGCAAAATACACATTGTTCAGGAGTCCAAAATCTAAGAACGTTGGGAAGTTTATGAAATTATCAGATTTCTTGTCCTTGGCAAAAAATCAGACTTCTCTGTCTGGTGTCTTGATCACTGTTGAGCATGCAGCCTATCTTGCAGAGAAGGTAGGACTGAATGTGATTAATGCAGTCCTTACTGCTTTGAACAAAGCTGGTTATGACAAGTCAGGGGCACAAAAAGTTTTGATTCAGTCCTCTGATAGCTCTGTACTAAAAGAATTCAAGGGTAAACCCAATTACGAGCTTGTCTATAACATTGTTGAGAAGGTTGGTGATGCTGAAAATGCAGTTGTTGAAGAGATCAAGGGCTTTGCAGATTCTGTAGTTGTTGCAAAGTCATCTGTGTTCCCCGAGAACTCTGCCTTCCTGATTGGATCTACCAAAATTGTGCCAAAGCTGAAATCTTCTAACCTCTCTGTCTATGTAGATCATTTTGAAAATGAGTTTGTATCACAGGCCTGGGATTTCTTCTCTGATGCAACAGTGGAGATCAACTCATTTGTTCAGGGAGCTCCTATTGATGGTGTCATCACAGGCTTCCCAAAGACAGCTAATAGATACAGAAGGAATCCTTGTTTGGTAGCTAAAACTACACCTGCTTACATGCAACCTGTTAAACCAGGTGATCTTATACAACTTGTTACCAAAGAATACCTGCCACCTGCTGCGGCTCCTCTCCCAGCCCTGACAGAATCTGAAGTGTCGGAAGCGCCTTTTCCTCCCATTTCAAATTCAAATACAACGGCCAACAGTCCTGCCCCTGCCTCTGGAACAGGAGCATCTCCGCCCGGCAGTGCACAGGCGAAGGTCAACATCTGCTTCTTTTTGTCCACTCTAGCTGTGCTTGTATCTTTCCTTCTGCTCCTTTGA 2469 0.4277 MWETRKSQPEKVCFVCCVFTVPLSLSLSPSLSLANLTQNRRTTLFSRHLSGRARRKFSNKAAAMWSSRALSPLLTLFILHSVAALVSAQGSTRTSWKTLSGDAPLVIARGGFSGIFPDSSLAAYNLALITSVPNVISWCDVQLTKDSAGICLPDIKLDNASDISGVFQNKSTTYLVNGVPTRGYFSVDYTIKDLSQVVLSQGVYSRTNKFDGNAFPIFTVEEFVKQVAPPVLWLNIQHDIFYSKHNLSMRNFVLSVSRKVIVKYISSPEVGFLRGIAARFNPNITKLIFRFMEQDDTEPSTNQTYGTLGKNLTFIKTFASGIMVPKIYIWPVDASSYLQPQTTLVLDAHKAGLEVFASDFTNDVPISYNYSYDPLAEYLQFIDNGDFSVDGVLSDFPITPSEAVGCFAHLSANAAKTVNISVISKYGASGDYPPCTDMAYNKAISDGVDVLDCPVQLSQDGVPFCLSSIDLIESSTVAQSSFSRLATSIPEIKSGSGIFSFSLKSADISTLTPSILNPYAKYTLFRSPKSKNVGKFMKLSDFLSLAKNQTSLSGVLITVEHAAYLAEKVGLNVINAVLTALNKAGYDKSGAQKVLIQSSDSSVLKEFKGKPNYELVYNIVEKVGDAENAVVEEIKGFADSVVVAKSSVFPENSAFLIGSTKIVPKLKSSNLSVYVDHFENEFVSQAWDFFSDATVEINSFVQGAPIDGVITGFPKTANRYRRNPCLVAKTTPAYMQPVKPGDLIQLVTKEYLPPAAAPLPALTESEVSEAPFPPISNSNTTANSPAPASGTGASPPGSAQAKVNICFFLSTLAVLVSFLLLL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2554 822 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 403 IPR017946 GO:0006629|GO:0008081
Prci2g2554 822 Gene3D Phosphatidylinositol (PI) phosphodiesterase 421 720 IPR017946 GO:0006629|GO:0008081
Prci2g2554 822 SUPERFAMILY PLC-like phosphodiesterases 103 402 IPR017946 GO:0006629|GO:0008081
Prci2g2554 822 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 75 815 - -
Prci2g2554 822 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 102 403 - -
Prci2g2554 822 SUPERFAMILY PLC-like phosphodiesterases 422 721 IPR017946 GO:0006629|GO:0008081
Prci2g2554 822 ProSiteProfiles GP-PDE domain profile. 104 404 IPR030395 GO:0006629|GO:0008081
Prci2g2554 822 ProSiteProfiles GP-PDE domain profile. 420 721 IPR030395 GO:0006629|GO:0008081
Prci2g2554 822 CDD GDPD_SHV3_repeat_2 422 720 - -
Prci2g2554 822 CDD GDPD_SHV3_repeat_1 104 403 - -
Prci2g2554 822 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 418 721 - -
Prci2g2554 822 MobiDBLite consensus disorder prediction 770 795 - -
Prci2g2554 822 Pfam Glycerophosphoryl diester phosphodiesterase family 427 715 IPR030395 GO:0006629|GO:0008081
Prci2g2554 822 Pfam Glycerophosphoryl diester phosphodiesterase family 111 398 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2554 Prci-Chr2 21628919 21636674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2554 68 822 Receptor kinase-like Gene Family AT4G26690 54.425 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2554 - - pcin:129302640 1561.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2554 2 21628919 21636674 Prci2g2554 2 21628919 21636674 ECH