Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2339 ATGACTGTGGGAGCCGGAATTTCTGTGGCCGATGCCAATTTGATGGTGTTGGGGAAGAAGGTCCTCTCTCAGGTTCCCCAAAACGTCGTCGTTACACCCTCCTCTTCAGTTCTAGATGGTGCTTTCATTGGAGTTGATTCTGATCGCAAGGGCAGCCGAAGAGTCTTTCCCATTGGAAAACTACAGGGGTTGCGCTTTATGTGTGTATTTCGCTTCAAAATGTGGTGGATGACGCAGCGAATGGGTACCTGTGGGCAAGATATTCCCTTTGAAACACAGTTCTTACTTGTGGAAGCGCACAAGAGTTCTGATATTGATGGGATCAGAAATGGAGAAGAAGACACTTATGCTGTTTTCTTGCCTCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAAGGAAATGAGCAAAACGAGATAGAGATCTGTGTGGAAAGTGGATGTCCTGATGTTGAGGGATTTGATGGGACTCATCTGGTATTCGTTGGAGCAGGATCAGACCCTTTTGAAGTCATTTCAAATGCAGTCAAGACTGTTGAGAAACACTTGCAGACATTCTCTCACCGTGAGAGGAAGAAGATGCCAGACATCTTGAACTGGTTTGGTTGGTGTACATGGGATGCTTTCTATACCAAAGTCGATTCAGAAGGAGTAAAGCAAGGATTGCAAAGCTTAGCAAAAGGTGGGATTCCCGCCAAGTTTGTTATAATTGATGATGGATGGCAATCTGTTGGCATGGACTCTAATGGTATTGAATGGAAATCTGATTTTGCGGCCAATTTTGCAAATCGCTTGACGCATATCAAAGAGAATCACAAGTTTCAGAAAGATGGTAAAGAGGGTCAAAGAGAAGAGGATCCTGCTCTGGGTTTTCGTCATATCTCGAAAGACATCAAAGAACAGCATGACATTAAGTACATTTACGTGTGGCATGCTATAACGGGATACTGGGGTGGTGTTAAGCCTGGGGTTACCGGAATGGAGCACTATGAGTCAAAAATGGCCTACCCTGTATCATCTCCTGGCGTTGAATCAAATCAACCAGATGAAGCTCTAACAACCATTGCCATGAATGGGCTCGGCCTTGTGAATCCTGAGAAAGTTTTTCACTTTTATAATGAACTCCACTCATATCTTGCATCCGCTGGTATGGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACCCTTGGGGCAGGCCATGGTGGTAGGGTCAAACTCGCAAGAAAATACCACCAGGCTTTAGAGGCATCAATCGCAAGAAACTTCCCTGACAATGGCATTATTTGTTGCATGAGTCACAATACTGATGGCTTGTACAGTGCAAAGCGATCAGCAGTAGTTAGGGCATCGGATGATTTCTGGCCAAGAGATCCAGCATCCCACACAATTCACATAGCTTCAGTTGCTTACAACACCGTTTTCCTTGGTGAATTTATGCAACCAGATTGGGATATGTTTCATAGCCTACATCCGATGGCTGAATATCATGGAGCAGCTCGAGCCGTAGGTGGATGTCCTATTTATGTAAGTGACAAGCCTGGACACCATGATTTTAATATTCTGAAAAAACTTGCACTGCCTGATGGTTCCATATTGAGGGCCAAACTCCCAGGAAGACCAACAAAAGATTGTTTGTTTTCTGATCCTGCAAGAGATGGAAAGAGTCTTCTGAAGATATGGAACCTGAATGATTTCTCTGGAGTTGTTGGGGTGTTCAATTGTCAAGGAGCAGGATGGTGCAAAGTTGGAAAGAAAAACCTTATCCATGATGAAAATCCAGGAACAATCACTGGCGTCATTAGGGCTAAGGATGTTGACTTTCTAACTAAGGTTGCTGGTGAGAAATGGAATGGAGACACCATCATATTCTCCCATGTTGGTGGAGAGGTTACTTACCTTCCAAAGGATGCATCTATTCCTATTACATTGAAATCCAAAGAGTTTGAAGTTTTCACAGTAGTTCCTGTTAAGGAAGTTAATGACGGTGTCAGATTTGCTCCTATTGGTTTGATGAAGATGTTCAACTCTGGAGGAGCCATCAAGGAATTGAATTGCGTATCTAATGGAACCACAAGCATTATCGTGGAAACGCGAGGCTGTGGTTTATTCGGAGCTTATTCATCAGCTCGACCTAAGACAGTGACAGTGGATTCAGAGGAGATGGAGTTCAGATATGATGAAGGATCTGGGCTGGTAACTATTGACTTGAGAGTACCAGAGAAAGAGTTGTACCAGTGGAACATATCTATCAACTACTGA 2262 0.4363 MTVGAGISVADANLMVLGKKVLSQVPQNVVVTPSSSVLDGAFIGVDSDRKGSRRVFPIGKLQGLRFMCVFRFKMWWMTQRMGTCGQDIPFETQFLLVEAHKSSDIDGIRNGEEDTYAVFLPLLEGDFRAVLQGNEQNEIEICVESGCPDVEGFDGTHLVFVGAGSDPFEVISNAVKTVEKHLQTFSHRERKKMPDILNWFGWCTWDAFYTKVDSEGVKQGLQSLAKGGIPAKFVIIDDGWQSVGMDSNGIEWKSDFAANFANRLTHIKENHKFQKDGKEGQREEDPALGFRHISKDIKEQHDIKYIYVWHAITGYWGGVKPGVTGMEHYESKMAYPVSSPGVESNQPDEALTTIAMNGLGLVNPEKVFHFYNELHSYLASAGMDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIICCMSHNTDGLYSAKRSAVVRASDDFWPRDPASHTIHIASVAYNTVFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCPIYVSDKPGHHDFNILKKLALPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNLNDFSGVVGVFNCQGAGWCKVGKKNLIHDENPGTITGVIRAKDVDFLTKVAGEKWNGDTIIFSHVGGEVTYLPKDASIPITLKSKEFEVFTVVPVKEVNDGVRFAPIGLMKMFNSGGAIKELNCVSNGTTSIIVETRGCGLFGAYSSARPKTVTVDSEEMEFRYDEGSGLVTIDLRVPEKELYQWNISINY 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2339 753 Pfam Raffinose synthase or seed imbibition protein Sip1 7 736 IPR008811 -
Prci2g2339 753 PANTHER - 1 750 IPR008811 -
Prci2g2339 753 SUPERFAMILY (Trans)glycosidases 194 525 IPR017853 -
Prci2g2339 753 FunFam Probable galactinol--sucrose galactosyltransferase 1 197 524 - -
Prci2g2339 753 Gene3D Aldolase class I 197 524 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2339 Prci-Chr2 18476826 18483082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2339 1 752 Glycoside Hydrolase AT1G55740 72.354 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2339 K06617 - gmx:100785506 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2339 2 18476826 18483082 Prci2g2339 2 18476826 18483082 ECH