Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2254 ATGGAAGATCTCAAGCCAACCATTGCAAGCTCTGCTCCTCTCACTCCGTTAGGCTTCCTCGATAGAGCTGCCACCGTCTACGGTGATTGCACTTCTATCATCTATAACCGCACCACCTTCACTTGGTCCCAAACCCACCGTCGCTGTCTCCAACTAGCTTCCTCTCTTTCCTCCATCGGAATCCGTGGCGGCGATGTCGTGTCCGTTGTCGCCCCCAACATCCCCGCCATGTACGAGCTACACTTCGCAGTTCCCTTTGCCGGCGCCGTCCTCAACAACATCAACACCCGCCTTGACGCTCGAACCATCTCCGTCATCCTCCGCCATGGTGAATCTAAGCTCGTGTTCGTCGACTGCGTCTCAAGGGCTCTGGTCCTGGATGCCATCTCCTTGCTGCCACCAGAGACTCAACGGCCTATCCTTATACTCATAACCGACGATTCTGTGGAACCCACTTCATCAGAGGGATTCTTCGATACGTACGAGGGGTTGGTTGCGAAGGGTGATCCGAATTTCCAGTGGATCCGACCCAAAAGCGAGTGGGATCCGATGATTTTGAATTATACGTCCGGTACGACGTCGTCTCCCAAGGGGGTGGTTCATTGCCACCGAGGCACATTCGTTATTGCCGTGGATTCTTTGATTGACTGGGCAGTCCCCGAACGACCGGTCTACTTATGGACGCTGAATATGTTCCATGTTAACGGATGGAGCTTCCCGTGGGGGATGGCAGCAGTCGGAGGAATCAATATCTGCATCCGTAAATTCGACGCCGCCACCGTGTTCACTCTGATCGAACGCCATGGTGTCACACACATGTGTGGTGCTCCGGTGGTGCTCAACATGTTAACAAGCTCCTCAACAAGAAGGCCTCTAAGTAGTCCCGTTCATGTCCTCACAGCCGGAGCACCGCCTCCAGCGGCGGTGCTGAAACGAACGGAAGCGTTAGGATTTGTGGTTAGTCACGGGTACGGGTTGACCGAAACAGGAGGTGTGGTGGTTACGTGTGCGTGGAAGCCTGGGTGGAACTTGTTGCCGGCGACGGAGAGGGCACGGATGAAGGCGAGGCAAGGGGTGAGAACAATCGGCCTGGATGAGATGGACGTGCTGGATCCGGATTCGGGTAAAAGTGCTAAACGAGACGGGTCAACGCTCGGGGAAGTGGTTCTTCGAGGCGGATGCGTCATGTTGGGCTACTTGAGAGACCCAGAAGCGAACTTCAAGTGCTTCAAGAATGGGTGGTTCTACACAGGGGACGTGGGAGTGATGCATCCAGATGGGTACTTAGAGATTAAAGATCGATCCAAGGATGTCATCATCAGTGGGGGTGAGAATCTGAGCAGCGTGGAAGTTGAATCGGTTCTGTACAGTAACCCGGCGGTGAACGAGGCAGCGGTGGTGGCGAGGCCGGACGAGTTCTGGGGAGAGACGCCGTGTGCGTTCGTGAGCTTGAGGGAGGGATTGGAGAAGAAGCCGACGGAGAAGGAGATAATGGAGTATTGCAGAGCAAGGATGCCGCACTTCATGGTTCCGAAGACGGTTGTGTTCAAGGAGGAGCTTCCCAAGACGTCGACCGGCAAGATTCAGAAGTATGTGCTGAGAAAGGAAGCCAAAGACATGGGATCGTTGAAACGCAGCAGACTGTGA 1647 0.5471 MEDLKPTIASSAPLTPLGFLDRAATVYGDCTSIIYNRTTFTWSQTHRRCLQLASSLSSIGIRGGDVVSVVAPNIPAMYELHFAVPFAGAVLNNINTRLDARTISVILRHGESKLVFVDCVSRALVLDAISLLPPETQRPILILITDDSVEPTSSEGFFDTYEGLVAKGDPNFQWIRPKSEWDPMILNYTSGTTSSPKGVVHCHRGTFVIAVDSLIDWAVPERPVYLWTLNMFHVNGWSFPWGMAAVGGINICIRKFDAATVFTLIERHGVTHMCGAPVVLNMLTSSSTRRPLSSPVHVLTAGAPPPAAVLKRTEALGFVVSHGYGLTETGGVVVTCAWKPGWNLLPATERARMKARQGVRTIGLDEMDVLDPDSGKSAKRDGSTLGEVVLRGGCVMLGYLRDPEANFKCFKNGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLREGLEKKPTEKEIMEYCRARMPHFMVPKTVVFKEELPKTSTGKIQKYVLRKEAKDMGSLKRSRL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2254 548 Gene3D - 437 541 IPR045851 -
Prci2g2254 548 Gene3D - 3 436 IPR042099 -
Prci2g2254 548 PANTHER ACYL-ACTIVATING ENZYME 6 544 - -
Prci2g2254 548 Pfam AMP-binding enzyme 21 441 IPR000873 -
Prci2g2254 548 FunFam 2,3-dihydroxybenzoate-AMP ligase 436 541 - -
Prci2g2254 548 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Prci2g2254 548 CDD ttLC_FACS_AEE21_like 12 535 - -
Prci2g2254 548 SUPERFAMILY Acetyl-CoA synthetase-like 12 539 - -
Prci2g2254 548 Pfam AMP-binding enzyme C-terminal domain 450 527 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2254 Prci-Chr2 17608187 17610336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2254 1 540 EF-hand Containing Proteins AT1G21540 61.636 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2254 - - twl:119990565 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2254 2 17608187 17610336 Prci2g2254 2 17608187 17610336 ECH