Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2148 ATGAACACTCTGTCTGAAGTACTCCAAGCACCAGACCCGAAGAATCTTGAGAAGTTTCTCGGCAGAATTCCCACAATTTTCAATGTGGTGATCTTCTCTGTTCATGGTTATTTTGGACAAGCTGATGTTCTTGGCTTGCCAGACACTGGTGGCCAGGTAGTTTATATCTTGGATCAAGTAAGAGCTCTGGAAGCAGAGTTGCTTCTCAGAATCAAGCAGCAGGGCCTAACTGTGAAGCCAATTCTTGTTGTTACAAGGCTCATACCTGATGCTAGAGGAACCAAATGTGACCAAGAGTTGGAACCAATCATTGATACCAAGCACTCCCACATTCTACGTGTGCCTTTTGTCACAGAAAAAGGAATCTTTCGTCCATGGGTTTCTCGCTTTGACATTTATCCATATCTAGAGAGGTTTACTCAGGATGCAACAACAAAGATTCTAGACCACCTCGAAGGGAAACCAGATCTTGTTATTGGAAATTACACTGATGGGAACTTGGTTGCATCTCTTATGGCTAACAAACTTGGGATAACTCTGGGAACTGTAGCTCACGCATTAGAAAAGACCAAATATGAAGATTCAGATGTCAAGTGGAAGGACCTTGACCCCAAATATCATTTCTCATGCCAGTTCATGGCTGATACAATTGCAATGAATGCAGCAGATTTCATCATCACCAGTACATACCAGGAAATTGCTGGAAGCAAAGATAGACCTGGACAGTACGAAAGCCATGCTGCATTTACACTTCCAGGGCTCTGTAGAGTTGTTTCAGGAATAAACGTATTTGATCCGAAATTCAACATAGCTGCACCTGGGGCTGACCAGTCTGTCTATTTCCCTTTTACGGAGAAAAACAAAAGACTCAATCAATTTCACCCTGCCATTGAAGAGCTACTTTACAGTAAAGTGGATAACAATGAGCACATTGGATCTTTATCAGACAGGAGAAAACCCATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTATCTGGTTTGGTTGAGTGGTTTGGGAAGAATAAGAGATTGAGAAACTTGGTAAACCTCGTCGTAGTTGGAGGCTTCTTTGACCCTTCAAAATCCAAAGACAGGGAGGAAATAGCAGAAATAAAAAAGATGCATGCTTTAATTGATAAGTACCAGCTAAAGGGTCAATTCAGATGGATTGCTGCACAGACGAACAGATATCGCAATGCTGAACTCTACCGATGCATCGCTGACACCAAAGGAGCTTTTGTGCAGCCTGCTTTATATGAAGCATTTGGACTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACATTTGCTACAAATCAAGGAGGTCCAGCTGAAATTATTGTTGATGGAATCTCCGGATTCCATATCAATCCCTTACATGGTGACGAATCTAGCAACAAAATTGCTGATTTCTTTGAGACTTGCAAAGAGGATTCAACAAACTGGAGCAAGATTTCATCTGCTGGATTGAGGCGCATAAATGAATGCTACACCTGGGAGATTTATGCAAACAGGCTACTGAACATGGGAAGCTTGTACACTTTCTGGAGGACAGTGAATAAGGAGCAAAAAGAAGCAAAACAAAAATACATCCATATGTTTTATAACCTTTTGTTCAAGAATTTGGTGAAGACTGTACCTTTTCCAAGTGATGAACCTCAAAGACCAGTTTCCAAGCAGCAGACTGTTAAACAGCAGGGCTCAAGACGTGTACAATCCACATTGTCAAGGTTACTGGGAGCTTGA 1758 0.4187 MNTLSEVLQAPDPKNLEKFLGRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLLRIKQQGLTVKPXILVVTRLIPDARGTKCDQELEPIIDTKHSHILRVPFVTEKGIFRPWVSRFDIYPYLERFTQDATTKILDHLEGKPDLVIGNYTDGNLVASLMANKLGITLGTVAHALEKTKYEDSDVKWKDLDPKYHFSCQFMADTIAMNAADFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPFTEKNKRLNQFHPAIEELLYSKVDNNEHIGSLSDRRKPIIFSMARLDVVKNLSGLVEWFGKNKRLRNLVNLVVVGGFFDPSKSKDREEIAEIKKMHALIDKYQLKGQFRWIAAQTNRYRNAELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHINPLHGDESSNKIADFFETCKEDSTNWSKISSAGLRRINECYTWEIYANRLLNMGSLYTFWRTVNKEQKEAKQKYIHMFYNLLFKNLVKTVPFPSDEPQRPVSKQQTVKQQGSRRVQSTLSRLLGA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2148 586 Pfam Glycosyl transferases group 1 312 489 IPR001296 GO:0016757
Prci2g2148 586 NCBIfam sucrose synthase 1 552 IPR012820 GO:0005985|GO:0016157
Prci2g2148 586 Gene3D Glycogen Phosphorylase B; 277 504 - -
Prci2g2148 586 Gene3D Glycogen Phosphorylase B; 30 547 - -
Prci2g2148 586 FunFam Sucrose synthase 277 504 - -
Prci2g2148 586 Gene3D - 1 25 - -
Prci2g2148 586 Pfam Sucrose synthase 1 303 IPR000368 GO:0005985|GO:0016157
Prci2g2148 586 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 45 513 - -
Prci2g2148 586 PANTHER - 1 556 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2148 Prci-Chr2 16340139 16343574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2148 1 557 Glycosyltransferase AT4G02280 66.607 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2148 K00695 - gmx:100792097 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2148 2 16340139 16343574 Prci2g2148 2 16340139 16343574 ECH