Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1975 ATGCCTTTCATCTCGCAATTTCAACGTCAATCCGATTACAATCTCTTCAGTTCCACCACTCCGATCGTGATTGACAATGGCGCATCATACTTTCGTATCGGATGGGCAGGAGAGACTGACCCCCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTCACCGGTGAAACTGTAACTATTGTTGGTGATCATAATCCAGCATTAATGAAGTACTTTGACTGCACTCGCTCTGGACCACGCTCAGCATTTGATAGCAATGTTGTTTACCAGTTTGAAGTAATGGAATACATTCTTGACTTTGGCTTTGACCGGATAGGGGCCAATGGATCGCAGGTTGATCATCCTGTCCTGATGACAGAATGTGTGTGTAATCCAGTTCAATCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACCTATGGTGTTCCATCAGTAGCCTTTGGGGTTGATGCAGCTTTCAGCTATAAGTATAATCAACACCTTGGAGTTTGCAATAAAGATGGTCTTGCTATGTGTCCTGGATTTACCACAACCCATGTGATTCCGTTTGTAGATGGGGAACCAGTTTATAAAGGATGTTGCCGTACAAATATCGGTGGCTTCCATGTGACTGATTATTTAAAGCAACTTCTCTCACTTAAATATCCCTACCATTTGGCTAGATTTACATGGGAAAAAGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCTTCTGAAGCTCGGCTGTTTCAGAGAGGAGGGAAGGAAGCTGAGGAGAAAACCAGGTGTTGGCAGCTCCCTTGGGTTCCACCACCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCTAGAAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAACTGGAAAATGAATTGCATGGTTTGGAGTTTCTCTTACAGCAGCTTGAACAAGTAGAGGAGAGTGACGTTCCATCTTTCCTGTCAGATACTGGCTATGTCTCTAAGCACGAGATAGAATCTGCCCGTGCCAAAGTTACACAATCTTTAAGGAAAGCAAAAGGTGAATCAAAGAGTGAACAAGCTGAAACTGAAACCGACTCTTCTAATAATGAGAAGTATTCTCTCATAAACATCCCTGATGAATCACTAACCCCAGAGCAGCTTATTGAAAAGAGGAAGCAGTTGTCACTTAAGTCCATGTCTGAAGGGCGGCAGCGATCAAAACAGAAACGCTACGAGGAGGAAATGCAACGAGAGAGAAGATTACAGCTGGAAGAGGAGAGACGCCTAGAGAACCCAGAGCTGTACCTGGAGCAATTGCATGCTAAATACAAAGATCTATTCGAAAAAGTTGACCAACGAAAAAGACTCAAGACAAACGGAAACCATTCAAATGGAAATAGTCTGTCTGGTGGTGTTGGCCGTGGTGAGAGGCTAAATGCTGCTCAAAGGGAAAGAATGCGCCTGTTGACAACTGCAGCCTTTGATCGTGGTAAAGGTGAGGATACATTTGGCGCCAGAGATGAAGATTGGCAACTTTACAAATTGATGAGTAGAGATAATGACGATGATGATGAGGGACCTGATGAGGATGAGGCAGAATTGGCTCGCATCTCTTCTAGGCTCCAGGATTTGGATCCAACATTTGTACCCAAGTTAGAAACTGGTAACACACAATCTGCTGAGGTGCCACGTTTTCGACCTCTCACCAAAGAGGATTTCCAGATTGTTCTTGGGGTCGAAAGATTCAGATGCCCTGAGATTTTGTTCAATCCAAACTGGATTGGGGTTGATCAGGTAGGATTAGACGAGATGGCCGGGGTCTCAATAAGGAGGTTACCAGACAAGGATGAAAGTTTGGAAGAGAGACTAACCGATTGCATACTTGTGACTGGTGGAAGTTCTCTGTTTCCTGGAATGATTGAACGCCTTGAAGCTGGGATTAGGATGATAAGACCCTGCGGATCACCTATAAAAATAGTTAGAGCACTGGATCCAGTTTTGGATGCATGGAGGGGGGCTTCTGCATATGCCTCATCTTCTCTGTTCCATACGCAAACTTTCAGTAGGACGGATTATTATGAAAAGGGTGAAGATTGGCTTCGCAGTTATCAACTTCAGTATACATTATAG 2166 0.4404 MPFISQFQRQSDYNLFSSTTPIVIDNGASYFRIGWAGETDPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEVMEYILDFGFDRIGANGSQVDHPVLMTECVCNPVQSRSKMAELLFETYGVPSVAFGVDAAFSYKYNQHLGVCNKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGFHVTDYLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAQDYASEARLFQRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQLEQVEESDVPSFLSDTGYVSKHEIESARAKVTQSLRKAKGESKSEQAETEKXDSSNNEKYSLINIPDESLTPEQLIEKRKQLSLKSMSEGRQRSKQKRYEEEMQRERRLQLEEERRLENPELYLEQLHAKYKDLFEKVDQRKRLKTNGNHSNGNSLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSRDNDDDDEGPDEDEAELARISSRLQDLDPTFVPKLETGNTQSAEVPRFRPLTKEDFQIVLGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLPDKDESLEERLTDCILVTGGSSLFPGMIERLEAGIRMIRPCGSPIKIVRALDPVLDAWRGASAYASSSLFHTQTFSRTDYYEKGEDWLRSYQLQYTL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1975 722 FunFam ARP5 actin-related protein 5 homolog 612 681 - -
Prci2g1975 722 Gene3D Actin; Chain A, domain 4 522 611 - -
Prci2g1975 722 MobiDBLite consensus disorder prediction 397 427 - -
Prci2g1975 722 FunFam Actin-related protein 5 171 202 - -
Prci2g1975 722 Gene3D Actin; Chain A, domain 4 203 253 - -
Prci2g1975 722 FunFam Actin-related protein 5 18 170 - -
Prci2g1975 722 Pfam Actin 19 269 IPR004000 -
Prci2g1975 722 Pfam Actin 587 714 IPR004000 -
Prci2g1975 722 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
Prci2g1975 722 Gene3D - 18 441 - -
Prci2g1975 722 PANTHER ACTIN 21 710 IPR004000 -
Prci2g1975 722 MobiDBLite consensus disorder prediction 355 427 - -
Prci2g1975 722 Gene3D - 176 202 - -
Prci2g1975 722 MobiDBLite consensus disorder prediction 355 380 - -
Prci2g1975 722 FunFam Actin-related protein 5 582 611 - -
Prci2g1975 722 Gene3D - 682 710 - -
Prci2g1975 722 SUPERFAMILY Actin-like ATPase domain 18 159 IPR043129 -
Prci2g1975 722 Coils Coil 309 332 - -
Prci2g1975 722 FunFam Actin-related protein 5 203 257 - -
Prci2g1975 722 Coils Coil 421 441 - -
Prci2g1975 722 MobiDBLite consensus disorder prediction 529 550 - -
Prci2g1975 722 SMART actin_3 19 718 IPR004000 -
Prci2g1975 722 FunFam Putative actin-related protein 5 682 710 - -
Prci2g1975 722 Gene3D - 612 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1975 Prci-Chr2 14899635 14905410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1975 588 709 Miscellaneous Gene Families AT2G42100 33.607 2.72e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1975 K11672 - gmx:100808396 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1975 2 14899635 14905410 Prci2g1975 2 14899635 14905410 CCT
Prci2g1975 2 14899635 14905410 Prci2g1975 2 14899635 14905410 ECH