Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1947 ATGGCTGCCTCCCTCTCCACTGTCGGAGCAGTCAACAGAACTCCACTGAGCATTAATGGGTCTGGAGCTGGAGCTTCGGTTCCGAGCTCAGCTTTCATGGGCACGAGCTTGAAGAAGGTCATGGCTTCAAGGCTTCCCTACAAGGTTTCATCTGGGAACTTTAAGGTTGTTGCTGCAGAGAAAGAGATTGATGAGAAGCAGCAGACAGAGAAGGACAGATGGAAGGGTCTTGCTTATGACATGTCAGATGACCAGCAAGACATCACCAGAGGGAAGGGAATGGTGGACACTCTGTTCCAAGCTCCCATGCAAACTGGAACTCACTATGCTGTCATGAGCTCTTACGAGTACCTCAGCGCCGGTCTTCGCCAGTACAACCTTGACAACAACATGGACGGCTTTTACATTGCTCCTGCCTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTGCCTAACATCAAGATTCCTCTCATCCTCGGTATATGGGGAGGCAAAGGTCAAGGAAAATCTTTCCAGTGTGAGCTTGTCTTCGCCAAGATGGGAATCAACCCCATCATGATGAGTGCCGGAGAGCTGGAGAGCGGGAACGCAGGAGAGCCAGCAAAACTGATCAGGCAAAGGTACCGTGAAGCAGCAGACATAATCAAGAAGGGAAAGATGTGCTGTCTGTTCATCAACGATCTGGACGCCGGAGCTGGTCGTATGGGAGGAACCACCCAATACACAGTGAACAACCAGATGGTGAACGCCACTCTGATGAACATCGCTGACAACCCAACCAACGTGCAACTCCCTGGTATGTACAACAAGGAAGAGAATCCACGTGTCCCCATCATCGTCACCGGTAACGACTTCTCCACCCTCTACGCCCCCCTCATCCGTGACGGTCGTATGGAGAAATTCTACTGGGCCCCCACCAGAGAAGACCGCATCGGTGTCTGCAAGGGAATCTTCCGCACCGACGGTGTCGCCGACGAGGACATCGTCAAGCTCGTCGATACCTTCCCAGGCCAATCCATCGATTTCTTCGGAGCTTTGAGGGCAAGAGTGTATGACGACGAAGTGAGGAAGTGGATATCGGGGATAGGAGTAGAGGACGTGGGGAAGAAGCTGGTGAACTCGAAGGAAGGGCCACCGACGTTCGAGCAGCCGAAGATGTCGGTGGAGAAGCTGTTGGAGTACGGAAACATGTTGGTGCAAGAACAAGAGAACGTGAAGAGAGTCCAATTGGCTGATAAGTACCTGAGCGAGGCTGCACTTGGTGACGCCAACCAAGATTCTATTTCAAGAGGAACTTTCTACGGCCAAGCAGCACAGCAAGTAAACATACCTGTTCCGGAAGGATGTACTGATCCAAATGCCGCAAACTTTGACCCAACTGCCAGGAGTGATGACGGAAGCTGCTTGTATCAATTCTAA 1434 0.5153 MAASLSTVGAVNRTPLSINGSGAGASVPSSAFMGTSLKKVMASRLPYKVSSGNFKVVAAEKEIDEKQQTEKDRWKGLAYDMSDDQQDITRGKGMVDTLFQAPMQTGTHYAVMSSYEYLSAGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVADEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVEDVGKKLVNSKEGPPTFEQPKMSVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDSISRGTFYGQAAQQVNIPVPEGCTDPNAANFDPTARSDDGSCLYQF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1947 477 PANTHER - 16 475 IPR044960 -
Prci2g1947 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 344 IPR027417 -
Prci2g1947 477 Gene3D - 311 423 - -
Prci2g1947 477 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 126 310 - -
Prci2g1947 477 Pfam ATPase family associated with various cellular activities (AAA) 166 307 IPR003959 GO:0005524|GO:0016887
Prci2g1947 477 Gene3D - 126 310 IPR027417 -
Prci2g1947 477 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 311 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1947 Prci-Chr2 14676989 14680480 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1947 - - gmx:100806240 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1947 2 14676989 14680480 Prci2g1947 2 14676989 14680480 ECH