Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1915 ATGAATGGCAACGGAGATGAAGCAGGAGGTGACGCGGCGGCATTGCTTGGACTCAAGGTCTACATGTGGGGTTACCTCCCTGGAGCTCTGCCGCAGAGGTCGCCGCTCCTGACGCCGCTGCCTGTTAGGGTTCCGGCTACGGTTGGTCCTGCTGGTTACTCTTGGAAGGATGTTTGCGGTGGTGGTTGTGGATTCGCCTTGGCTATCTCTGCAGAGTCAGGAAAGCTCATCACTTGGGGATCAACTGATGATCTAGGTCAAAGCTATGTGGCATCTGGCAAGCACGGGGAAATTCCTGAGCCTTTCCCTATTCCAACTGAAGCTTCTATCGTAAAGGCTGCAGCTGGATGGGCACATTGTGTTGCTGTTACTGATGGTGGTGAAGTTTACACATGGGGATGGAAGGAATGTGTTCCGTCTGGGAAGGTATTTGGCGAATCGTCAACAGGGGTAACTCCTGAAAAGGATTTATCTGAAAGGCAGAGTTCATTATTGACAGAGCAAGTGAGCCCTCGCTCCCAAGGCTCAAGATCAACTGGCGGAACTTCCAGTGCTAGTGGAGATGAAGGTACAAAGCGAAGGAGGGTTTCTTCAGCAAAGCAAACAGCTGATAGCTCATCATCTGGTGATGATAATCTGACAGCATTTCCATGTCTTGTTGCACTAAACCGGGGTATAAGAATAACAACTGTTGCTGCTGGTGGACGCCATACCTTAGCATTGTCAGTTTCAGATATAGGACAGGTGTGGGGATGGGGCTATGGAGGAGAAGGGCAGCTTGGCTTAGGCTCCAGAATACGCATGGTGTCCTCTCCTCATCTTATTCCTTGCATTAATTCTTCTACATATGGAAAAGATAGATTTGTTGCACTTGCCCAAGGAAGTGGGGGACAGAATTTTAGAGTTCCTGGAAGTTATGTAAAGGGAATTGCTTGTGGCGGTCGGCACAGTGCAGTCATCACAGATGCTGGAGCTTTGCTTACTTTTGGTTGGGGACTATATGGACAGTGTGGGCAAGGAAGTACAGATGATGAGCTAAGCCCTGCATGTGTGTCTTCCTTGTTGGGTATCCGAATAGAGGGAGTCGCTGCAGGACTGTGGCATACAGCCTGTGTGTCTGCTGATGGTGATGTATATGCCTTTGGTGGAAATCAGTTTGGCCAGCTGGGAACTGGTGATGATCAAGCTGAGACTCTACCAAGGCTACTGGATTCTCCAAGCTTAGAAAACCAGCATGCAAGGATTGTATCCTCAGGGGCTCGCCATGCTGCAGTGATAACAGAGGAAGGAAAAGTTTTTTGTTGGGGATGGAACAAGTATGGACAGCTTGGCCTTGGTGATGTGATTGACCGTAACATTCCTTCTGAAGTCACCATTGAAGGATGTGTACCTAAAAACGTTGCATGTGGTTGGTGGCATACTCTTCTTCTGGCCGAGTCACCTACTTGA 1449 0.4914 MNGNGDEAGGDAAALLGLKVYMWGYLPGALPQRSPLLTPLPVRVPATVGPAGYSWKDVCGGGCGFALAISAESGKLITWGSTDDLGQSYVASGKHGEIPEPFPIPTEASIVKAAAGWAHCVAVTDGGEVYTWGWKECVPSGKVFGESSTGVTPEKDLSERQSSLLTEQVSPRSQGSRSTGGTSSASGDEGTKRRRVSSAKQTADSSSSGDDNLTAFPCLVALNRGIRITTVAAGGRHTLALSVSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLIPCINSSTYGKDRFVALAQGSGGQNFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPACVSSLLGIRIEGVAAGLWHTACVSADGDVYAFGGNQFGQLGTGDDQAETLPRLLDSPSLENQHARIVSSGARHAAVITEEGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVPKNVACGWWHTLLLAESPT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1915 482 Gene3D - 179 297 IPR009091 -
Prci2g1915 482 MobiDBLite consensus disorder prediction 145 210 - -
Prci2g1915 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 376 429 IPR000408 -
Prci2g1915 482 Pfam Regulator of chromosome condensation (RCC1) repeat 110 134 - -
Prci2g1915 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 310 320 IPR000408 -
Prci2g1915 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 430 480 IPR000408 -
Prci2g1915 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 231 241 IPR000408 -
Prci2g1915 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 74 126 IPR000408 -
Prci2g1915 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 362 372 IPR000408 -
Prci2g1915 482 PRINTS Chromosome condensation regulator RCC1 signature 249 263 IPR000408 -
Prci2g1915 482 PRINTS Chromosome condensation regulator RCC1 signature 425 446 IPR000408 -
Prci2g1915 482 PRINTS Chromosome condensation regulator RCC1 signature 110 123 IPR000408 -
Prci2g1915 482 PRINTS Chromosome condensation regulator RCC1 signature 365 383 IPR000408 -
Prci2g1915 482 SUPERFAMILY RCC1/BLIP-II 19 480 IPR009091 -
Prci2g1915 482 Gene3D - 298 482 IPR009091 -
Prci2g1915 482 Gene3D - 7 163 IPR009091 -
Prci2g1915 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 324 375 IPR000408 -
Prci2g1915 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 416 426 IPR000408 -
Prci2g1915 482 MobiDBLite consensus disorder prediction 145 187 - -
Prci2g1915 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 247 323 IPR000408 -
Prci2g1915 482 Pfam Regulator of chromosome condensation (RCC1) repeat 247 320 IPR000408 -
Prci2g1915 482 Pfam Regulator of chromosome condensation (RCC1) repeat 324 372 IPR000408 -
Prci2g1915 482 Pfam Regulator of chromosome condensation (RCC1) repeat 375 426 IPR000408 -
Prci2g1915 482 Pfam Regulator of chromosome condensation (RCC1) repeat 429 477 IPR000408 -
Prci2g1915 482 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 73 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1915 Prci-Chr2 14471800 14478180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1915 - - gmx:100778841 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1915 2 14471800 14478180 Prci2g1915 2 14471800 14478180 CCT
Prci2g1915 2 14471800 14478180 Prci2g1915 2 14471800 14478180 ECH