Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1908 ATGGACGCTGCAGATCCTTCTCGAGCTTTCGTCAAAGACGTTAAGCGCATTATCGTCAAGGTTGGGACTGCTGTTGTGACCCGTAAAGATGGAAGATTAGCAGTCGGAAAATTGGGGACGCTTTGTGAGCAGATTAAGGAGCTTAACTCTCTAGGATATGAAGTTATTTTGGTGTCCTCGGGTGCGGTTGGACTTGGTCGCCAAAGGCTTAGATACAGGAAATTAATTAACAGCAGCTTTGCTGATCTACAAAAGCCACAAGTTGAACTTGATGGCAAAGCATGCGCAGCAGTTGGACAAAACAGTCTAATGGCCATATATGATGCTTTGTTCACTCAGCTCGATGTGACATCAGCTCAGCTTCTGGTGACAGACAATGATTTTAGAGATAGAGATTTCAGAAAGCAACTTACTGAAACTTTAAAATCTTTGTTAGCACTAAAAGTCATACCCATATTCAATGAGAATGATGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGACAATGACAGTTTATCAGCTTTATTGGCCTTGGAATTGAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGTCTTTATAGTGGCCCTCCAAGTGACCCACGGTCAAGGCTTATTCATACATACATCAAGGAAAGGCATCAGAATGAAATTACCTTCGGAGATAAGTCTAGGGTGGGAAGAGGCGGAATGACTGCCAAAGTAAAGGCTGCTGTAAATGCAGCTGAAGCTGGAATTCCTGTTGTTATTACCAGTGGTTATGCACCTGAAAATATCATTAAAGTCCTTCATGGTCAATGTATTGGAACTCTCTTCCATAAAGATGCTCATAAGTGGGTCCCAGTAAAGGAGGTATCAGCACGTGACATGGCAGTTGCAGCTCGGGACTGCTCTAGACGACTTCAGGCTTTATCCAAAGAAGAGAGGAAGCAAGTGTTGCTAAATATAGCTGATGCACTGGAAGCAAATGAAAAGGAGATAAGGATTGAAAATGAGGCTGACGTCGCTGATGCACAGCAAGCAAATCTTGATAAATCCTTGGTTGCTAGGCTGCTTCTAAAGCCTGGGAAGATTGCAGGCCTTGCAAAGAACATCAGAACTCTTGCAAACATGGAAGATCCAATTGGTCGAGTATTAAAGCGGACAGAGGTTGCAGAGGGGCTAATTCTGGAGAAAACATCATCTCCTTTAGGTGTTCTCTTGATTGTTTTTGAGTCCCGCCCCGATGCCCTAGTACAGATAGCTTCCTTGGCAATTCGAAGTGGGAATGGGCTTCTCTTAAAGGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTACTGAAGCCATCCCCAAAACTGTTGGTGGAAAACTTATTGGACTCGTGACCTCAAGAGCGGAGATCCCTGAGCTGCTTAAGCTTGATGATGTGATTGATCTGGTTATTCCACGAGGCAGCAACAAACTTGTCTCTAGCATTAAAAGTTCCACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATTTGCCACGTCTATGTTGATAAGTCTGCCAATATGGAAATGGCTAGGCGGATTGTATTGGATGCAAAAGTGGATTATCCAGCTGGTTGCAATGCCATGGAAACACTTCTTATTCACAAGGACTTAGCAAAGAAAGGTTTGCTCCATGATATTATTGTTGACCTACGGACTGAAGGTGTTACTTTATATGGAGGACCCAAGGCAAGCTCAATGTTGAATATTCCAAAGGCGCATTCATTTCATCATGAGTACAGTTCATTGGCGTGCACTGTTGAAATTGTGGATGATGTGCATTCAGCTATTGATCATATAAATCTTTATGGAAGTGCACATACTGATTGCATAATTGCTGAGGACTGCGAAGTTGCTGAAGTGTTTCTACGCCAAGTAGACAGTGCTGCTGTTTTCCACAATGCTAGCACAAGATTTTGTGATGGGGCACGATTTGGACTGGGTGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCCGTAGGAGTTGAAGGATTGTTAACAACCAGATGGGTACTTAGAGGAAGTGGACAAGTGGTTGACGGTGATAGAGTTTGTTACACCCACAAGGACCTTACCACTTGA 2145 0.434 MDAADPSRAFVKDVKRIIVKVGTAVVTRKDGRLAVGKLGTLCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRKLINSSFADLQKPQVELDGKACAAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDRDFRKQLTETLKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPRSRLIHTYIKERHQNEITFGDKSRVGRGGMTAKVKAAVNAAEAGIPVVITSGYAPENIIKVLHGQCIGTLFHKDAHKWVPVKEVSARDMAVAARDCSRRLQALSKEERKQVLLNIADALEANEKEIRIENEADVADAQQANLDKSLVARLLLKPGKIAGLAKNIRTLANMEDPIGRVLKRTEVAEGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPKTVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSSIKSSTKIPVLGHADGICHVYVDKSANMEMARRIVLDAKVDYPAGCNAMETLLIHKDLAKKGLLHDIIVDLRTEGVTLYGGPKASSMLNIPKAHSFHHEYSSLACTVEIVDDVHSAIDHINLYGSAHTDCIIAEDCEVAEVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWVLRGSGQVVDGDRVCYTHKDLTT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1908 714 NCBIfam delta l-pyrroline-5-carboxylate synthetase 8 712 IPR005766 GO:0003824|GO:0006561
Prci2g1908 714 CDD ALDH_F18-19_ProA-GPR 296 696 IPR000965 GO:0004350|GO:0006561
Prci2g1908 714 Pfam Amino acid kinase family 15 260 IPR001048 -
Prci2g1908 714 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Prci2g1908 714 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 698 IPR016162 GO:0016491
Prci2g1908 714 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 607 629 IPR020593 GO:0004350|GO:0006561
Prci2g1908 714 Pfam Aldehyde dehydrogenase family 295 558 IPR015590 GO:0016491
Prci2g1908 714 NCBIfam glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Prci2g1908 714 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Prci2g1908 714 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 512 658 IPR016163 GO:0016620
Prci2g1908 714 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Prci2g1908 714 PIRSF P5C_synthetase 1 714 IPR005766 GO:0003824|GO:0006561
Prci2g1908 714 Gene3D - 5 288 IPR036393 -
Prci2g1908 714 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 700 IPR000965 GO:0004350|GO:0006561
Prci2g1908 714 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Prci2g1908 714 NCBIfam glutamate-5-semialdehyde dehydrogenase 302 689 IPR000965 GO:0004350|GO:0006561
Prci2g1908 714 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 713 - -
Prci2g1908 714 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Prci2g1908 714 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Prci2g1908 714 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Prci2g1908 714 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Prci2g1908 714 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Prci2g1908 714 FunFam Delta-1-pyrroline-5-carboxylate synthase 512 658 - -
Prci2g1908 714 SUPERFAMILY ALDH-like 296 699 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1908 Prci-Chr2 14437721 14447667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1908 K12657 - gmx:548058 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1908 2 14437721 14447667 Prci2g1908 2 14437721 14447667 CCT
Prci2g1908 2 14437721 14447667 Prci2g1908 2 14437721 14447667 ECH