Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1862 ATGGCCATGGACGATCGAAACGTGAGGAGAATGAGCACCGGCTTAACCGAGGTGGTCCTGGAACTTGTTATGGCTTTTATTCACGACCCCAAAGATCGGGATGCGGTTTCTCAGGTCTGCCGGCAGTGGTACGAGATTGACTGCTTGACGCGAAAGCATGTGACGATTGCTCTCTGCTACACGTCCACCCCGGACCGTCTCCGCCGGAGATTTCCGCACCTGGAGTCGCTGAAGCTGAAAGGGAAGCCGAGGGCGGCCATGTTCAATTTGATTCCGGAGGATTGGGGAGGATATGTGGAGCCTTGGGTAAAAGAGATTGCTAAATATTTTGATTGTTTGAAGTCGCTTCATTTCCGTCGCATGATTGTGCGGGATTCCGATCTTGAGCTTCTTGCGCGGTCACGGGGACACGTTCTTCAAGCTCTTAAACTCGACAAGTGCTCTGGTTTTACAACGGATGGCCTTTACCATATTGCCCGATCTTGCAGGAATTTAAGAGTCCTGTTTTTGGAGGAGAGCCAAATTGTTGAGAATGATGGCGAATGGCTGCATGAACTTGCTTTGAATAATACTGTTCTTGAGGCTCTAAATTTTTACTTGACAGATCTTATCAATATCAGAATTCAGGACCTTGAACTGATAGCAAATAACTGTCGCAACTTAGTTTCCGTGAAAATTACTGATATTGAGATCCTGAAGCTTGTAAACTTCTTTCGTTCTGCATCTGCACTAGAAGAATTTTGTGGAGGCTCCTATAATGAGCAGCCGGAGAAGTACGCTGCTGTACCATTTCCCGCAAAGTTATGTCGATTGGGTTTAACGTATATTGGAAAGAATGAACTTCCAATAGTTTTCCCTTTTGCATCCGTTCTGAAAAAATTGGATCTCCTATATTCGATGCTGGATACAGAGGATCATTGTGCGTTAATCCATAAATGCCCCAACTTGGAAGTCCTCGAGTCAAGGAATGTAATTGGTGATAGAGGACTCGAAGTTCTTGCGCAAAGCTGCAAGAAGCTCAAGAGACTCAGGATTGAGCGAGGAGATGATGAGCAAGGGATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTAATTGCTCTGTCACAGGGCTGTCCAGAACTTGAATATTTGGCTGTTTATGTATCCGACATTACAAATGCATCCCTGGAACACATTGGTACTCACATGAAAAACCTTACTGATTTTCGCCTTGTCTTGCTAGACCGTGAGGCAACCATAACTGATTTACCTCTTGACAATGGGGTGAGGGCTTTATTAAGGGGTTGTGATAAGCTGAGAAGATTTGCTCTGTATCTTCGCTCCGGGGGCTTGACTGATGCCGGCCTTGCCTATATTGGGCAATACAGCCAAAATGTGAGATGGATGCTTCTGGGTTATGTAGGGGAATCTGATGCAGGGCTTCTGGAGTTTTCAAGGGGCTGCCCTAGCCTTCAAAAACTTGAAATGAGAGGCTGTTCTTTCAGTGAGCATGCATTAGCTGTTGTGGCCACACAACTGACTTCTTTAAGGTATCTATGGGTGCAAGGGTATAGACAATCTGCATCTGGGCGTGATCTTTTTGTAATGGCAAGACCCTTCTGGAATATCGAGTTGATTCCTTCTAGAAGAGTTCTTGTTACTTATCCAAGTGGGGAATCTGTAGTGGCTGAGCATCCGGCGCATATTCTTGCATACTACTCTCTTGCAGGACCAAGATCAGATTTTCCAGATACCGTTGTTCCTTTGGATCCAACCGCATATGTTGAAATTTAG 1779 0.4553 MAMDDRNVRRMSTGLTEVVLELVMAFIHDPKDRDAVSQVCRQWYEIDCLTRKHVTIALCYTSTPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGYVEPWVKEIAKYFDCLKSLHFRRMIVRDSDLELLARSRGHVLQALKLDKCSGFTTDGLYHIARSCRNLRVLFLEESQIVENDGEWLHELALNNTVLEALNFYLTDLINIRIQDLELIANNCRNLVSVKITDIEILKLVNFFRSASALEEFCGGSYNEQPEKYAAVPFPAKLCRLGLTYIGKNELPIVFPFASVLKKLDLLYSMLDTEDHCALIHKCPNLEVLESRNVIGDRGLEVLAQSCKKLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAVYVSDITNASLEHIGTHMKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDAGLAYIGQYSQNVRWMLLGYVGESDAGLLEFSRGCPSLQKLEMRGCSFSEHALAVVATQLTSLRYLWVQGYRQSASGRDLFVMARPFWNIELIPSRRVLVTYPSGESVVAEHPAHILAYYSLAGPRSDFPDTVVPLDPTAYVEI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1862 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 30 247 - -
Prci2g1862 592 FunFam Coronatine-insensitive protein 1 52 587 - -
Prci2g1862 592 Gene3D - 3 51 - -
Prci2g1862 592 SUPERFAMILY RNI-like 90 405 - -
Prci2g1862 592 SUPERFAMILY RNI-like 365 521 - -
Prci2g1862 592 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Prci2g1862 592 Gene3D Ribonuclease Inhibitor 52 588 IPR032675 -
Prci2g1862 592 Pfam F-box 13 53 IPR041567 -
Prci2g1862 592 SMART LRR_CC_2 373 397 IPR006553 -
Prci2g1862 592 SMART LRR_CC_2 313 336 IPR006553 -
Prci2g1862 592 SMART LRR_CC_2 431 457 IPR006553 -
Prci2g1862 592 SMART LRR_CC_2 136 161 IPR006553 -
Prci2g1862 592 SMART LRR_CC_2 483 507 IPR006553 -
Prci2g1862 592 CDD F-box_AtTIR1-like 15 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1862 Prci-Chr2 13948881 13953713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1862 K13463 - gmx:100793081 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1862 2 13948881 13953713 Prci2g1862 2 13948881 13953713 CCT
Prci2g1862 2 13948881 13953713 Prci2g1862 2 13948881 13953713 ECH