Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1850 ATGTCGCACCAGAAGCAAGCCGAAGAAGCCATAATGCCGAGCATGAATCCGACGCCGACTGAGCGTGACGGGAGAGAGGAAAGAGAGAAGGGCGATGCCGATACTACTGTTTTTACTTTCAAATCCTTTCTCTGGCATGGCGGGTCTGTCTATGATGCCTGGTTCAGCTGCGCTTCGAATCAGGTTGCTCAAGTTCTGTTGACGCTGCCGTATTCTTTCTCTCAGCTGGGAATGCTTTCGGGCATCATATTTCAAATATTCTATGGTTTCCTTGGAAGCTGGACTGCTTATTTAATCAGCATTCTGTACATCGAGTACCGAAGCCGGAAAGAGAAAGAAAACGTCAACTTCAAGAACCACGTCATTCAGTGGTTCGAAGTGTTGGATGGCTTACTGGGTCCATATTGGAAAGCTATCGGACTGGCTTTCAACTGTACTTTCCTCCTCTTTGGCTCTGTTATCCAGCTTATTGCCTGTGCAAGTAATATATACTACATAAATGACAACCTGGACAAGAGGACATGGACTTATATTTTTGGAGCATGTTGTGCCACCACCGTTTTCATACCATCCTTCCACAATTACAGGATTTGGTCCTTCCTTGGCCTTGGTATGACGACTTACACCGCTTGGTACTTGACCATCGCATCTGCCGTACACGGTCAGGTTGAAAACGTGACTCACTCGGGCCCAACCAATCTGGTTCCGTATTTCACTGGCGCCACCAATATACTGTACACTTTCGGTGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATACATCTATTTATTTGCCACCATTTATGTGTTCACCCTCACCATACCATCCGCTGCTACCGTCTACTGGGCCTTTGGAGACCAACTCACCAAGCAGTCCAATGCCTTGGCGCTCCTCCCTCGCTCCGGCTGGCGTGATCTCGCTGTGATTTTAATGCTCATTCACCAGTTCATTACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTAATAGGAATGCATGACACGAAGAGCATATGTTTGAGGGCTCTTGCGAGGCTGCCTGTTGTTGTACCCATATGGTTCTTGGCTATCATTTTCCCTTTCTTCGGCCCCATAAACTCCGCTGTGGGGGCTCTTCTGGTCAGCTTCACCGTCTACATCATCCCTGCCATGGCCCATATGCTCACTTTCAGGTCTGCCTCCGCACGTCAGAATGCAGCAGAAAAGCTTCCAGCATTCATACCAAACTGGACGGTGATGTACGTGGTGAATGCGTTGTTGGTGGTGTGGGTTTTGGTGATAGGGTTTGGATTTGGAGGGTGGGCTAGCCTCACTAATTTCATTGACCAGGTATCAACCTTTGGTCTATTTGCCAAGTGCTATCAGTGCCCCCCTACCAAGCCGCCTCCTCATTTCAATCACACAGCACCTCATCATCCCTGA 1461 0.4839 MSHQKQAEEAIMPSMNPTPTERDGREEREKGDADTTVFTFKSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQIFYGFLGSWTAYLISILYIEYRSRKEKENVNFKNHVIQWFEVLDGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASAVHGQVENVTHSGPTNLVPYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATIYVFTLTIPSAATVYWAFGDQLTKQSNALALLPRSGWRDLAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPAMAHMLTFRSASARQNAAEKLPAFIPNWTVMYVVNALLVVWVLVIGFGFGGWASLTNFIDQVSTFGLFAKCYQCPPTKPPPHFNHTAPHHP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1850 486 PANTHER OS05G0424000 PROTEIN-RELATED 52 429 - -
Prci2g1850 486 Pfam Transmembrane amino acid transporter protein 46 439 IPR013057 -
Prci2g1850 486 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1850 Prci-Chr2 13718314 13722880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1850 1 481 Organic Solute Cotransporters AT2G21050 74.180 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1850 K13946 - mnt:21409053 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1850 2 13718314 13722880 Prci2g1850 2 13718314 13722880 CCT
Prci2g1850 2 13718314 13722880 Prci2g1850 2 13718314 13722880 ECH