Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1830 ATGAAGGCCTATTTCAAGTACAGTTGGCTCTTGTTCTTCACCAGAAAGTACAAGAGCAACGATCTGGTTCCACCTCGGGACCTCAAGGAGGTCTTTTCCGACTTTGCTGGCGGTGGGTCCCGCATGTCCGTCGAACAGTTCCGGCGTTTCCTGGTAGAGCACCAAGGCCACGTGGACTGCACCGTGGCGGAATCGGAGGTTATCGTGGAGAAGGTCCTGAAAGCACGAGAGGGGAATCGCGAAGCTACTCCTAATGATGACGATGATCAGCGGCATACTGAACAACATGGACTCGCTCTCGATGACGTCTTCCATTTTCTGCTTCTTGATGATTTCAACGGTCCTTTGAATTCTGAGGTTCATCATGACATGGAAGCTCCGTTGTCACACTATTTCATATATACAGGGCACAATTCGTATCTTACTGGGAATCAATTGAGCAGTGATTGTAGTGAAGAACCGATCATAAAGGCTCTGCAACGAGGCGTGAGGGTCATCGAACTAGATTTATGGCCTACTTCCAATAAAGATGATATCAAAGTAGATCATGGATGGACTCTTACCAATCCTGTTTCACCCCATAAATGTCTGGAGGCCATAAAGAAACATGCTTTTGTTAAATCTGAGTACCCAGTGATTATAACTATAGAAGACCACCTTACAAGAGATCTTCAAGCTAAATTTGCAGAGATGGTAACTCAAATACTTGGAGAATCGCTATATTATCCTCAGGCAGAACGTTTGACAGAATTCCCATCACCAAAATCATTGAGAAATAAAATAATTATATCCACCAAACCTCCAAAAGAACATCGTCATAAAAGTATTGAAGATAGAGGCGACAACTATGTGCAGGATGCAAGTGAATCGTCTGAAGAAGAAACATCATGGGGTCAGGAGTCAACTGACTTTATGGCTGAACCAGAGACTGAAGACAAGAATGGAAGTGACAAAGAAGAGGGAGATTCAAATGCAAGTGATCATCATAGGTCAGATCAACAGGATTCACCTGACTACAAACGCTTAATCACAATCTATGCAAAGAAACTCAAGGGCAGCTTAAAGGATAAATTGAAGATTGATAAGGAAGTTAGACGCCTAAGTTGGAATGAGCAGACACTTGAAAGGGCTTCTGAATCTCATGGAACTGATATTATAAGGTTCACACGGAAAAATATCCTCAGGGTATACCCAAGAGGGACGCGTGTCCAATCCTCAAATTTCAAGCCACATATTGGGTGGATGTATGGGGCTCAAATGGTGGCATTTAATATGCAGAAGCATGGCAAGAAGCTCTGGCTAATGCAGGGAATGTTCAGGGCAAATGGAGGGTGTGGTTATGTGAAAAAACCTGAAATAGTGATGCAAAATCTTCCAAATGGAGAACTGTTTGATCCTAAAAGGACATTGCGAGTGAAAAAGACATTAAAGGTAAAAGTGTACATGGGACATGGCTGGAGCTCAGATTTCAGTCCCACCCACTTTGATAAGTTCTCTCCACCAGATTTCTACACAAAGATCTGTATTGTTGGGGTGCCAGCTGATTGTGCCAAGAAGAAAACAGGGGTAATAATGGACAACTGGTTTCCTGTTTGGGAAGAGGAATTTGAATTCCCTCTTACTGTTCCAGAGCTTGCATTGCTTCGGATAATAGTGAGGGAGAAAGACCAGGGAAAGGATGACTTTGGTGGGCAGACATGTTTGCCGGTCTCAGAGCTGAGAGTGGGATTTCGTTCAGTCCCTTTGTATAACGAAAAGGGAGAGAAATATAAATCTGTAAAGCTTTTCGTGCGGTTTCAGTTCATTGACCAAGAAAATGCATTTTCAGTAGAATGA 1836 0.4314 MKAYFKYSWLLFFTRKYKSNDLVPPRDLKEVFSDFAGGGSRMSVEQFRRFLVEHQGHVDCTVAESEVIVEKVLKAREGNREATPNDDDDQRHTEQHGLALDDVFHFLLLDDFNGPLNSEVHHDMEAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTSNKDDIKVDHGWTLTNPVSPHKCLEAIKKHAFVKSEYPVIITIEDHLTRDLQAKFAEMVTQILGESLYYPQAERLTEFPSPKSLRNKIIISTKPPKEHRHKSIEDRGDNYVQDASESSEEETSWGQESTDFMAEPETEDKNGSDKEEGDSNASDHHRSDQQDSPDYKRLITIYAKKLKGSLKDKLKIDKEVRRLSWNEQTLERASESHGTDIIRFTRKNILRVYPRGTRVQSSNFKPHIGWMYGAQMVAFNMQKHGKKLWLMQGMFRANGGCGYVKKPEIVMQNLPNGELFDPKRTLRVKKTLKVKVYMGHGWSSDFSPTHFDKFSPPDFYTKICIVGVPADCAKKKTGVIMDNWFPVWEEEFEFPLTVPELALLRIIVREKDQGKDDFGGQTCLPVSELRVGFRSVPLYNEKGEKYKSVKLFVRFQFIDQENAFSVE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1830 611 PRINTS Phospholipase C signature 414 432 IPR001192 GO:0035556
Prci2g1830 611 PRINTS Phospholipase C signature 250 267 IPR001192 GO:0035556
Prci2g1830 611 PRINTS Phospholipase C signature 127 145 IPR001192 GO:0035556
Prci2g1830 611 PRINTS Phospholipase C signature 393 414 IPR001192 GO:0035556
Prci2g1830 611 PRINTS Phospholipase C signature 568 578 IPR001192 GO:0035556
Prci2g1830 611 PRINTS Phospholipase C signature 153 173 IPR001192 GO:0035556
Prci2g1830 611 SMART C2_3c 475 582 IPR000008 -
Prci2g1830 611 Gene3D C2 domain 470 610 IPR035892 -
Prci2g1830 611 SUPERFAMILY PLC-like phosphodiesterases 122 456 IPR017946 GO:0006629|GO:0008081
Prci2g1830 611 MobiDBLite consensus disorder prediction 259 338 - -
Prci2g1830 611 MobiDBLite consensus disorder prediction 289 303 - -
Prci2g1830 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 122 266 - -
Prci2g1830 611 Gene3D - 20 114 - -
Prci2g1830 611 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Prci2g1830 611 Pfam C2 domain 475 573 IPR000008 -
Prci2g1830 611 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 475 602 IPR035892 -
Prci2g1830 611 SUPERFAMILY EF-hand 18 116 IPR011992 -
Prci2g1830 611 CDD C2_PLC_like 473 601 - -
Prci2g1830 611 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 13 601 IPR001192 GO:0035556
Prci2g1830 611 Pfam Phosphatidylinositol-specific phospholipase C, X domain 124 266 IPR000909 -
Prci2g1830 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Prci2g1830 611 ProSiteProfiles C2 domain profile. 459 584 IPR000008 -
Prci2g1830 611 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 467 IPR017946 GO:0006629|GO:0008081
Prci2g1830 611 SMART plcy_3 339 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Prci2g1830 611 MobiDBLite consensus disorder prediction 306 338 - -
Prci2g1830 611 SMART plcx_3 122 266 IPR000909 -
Prci2g1830 611 MobiDBLite consensus disorder prediction 264 286 - -
Prci2g1830 611 FunFam Phosphoinositide phospholipase C 470 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1830 Prci-Chr2 13514109 13517404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1830 5 601 Acyl Lipid Metabolism Gene Families AT2G40116 56.634 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1830 K05857 - gmx:100820253 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1830 2 13514109 13517404 Prci2g1830 2 13514109 13517404 CCT
Prci2g1830 2 13514109 13517404 Prci2g1830 2 13514109 13517404 ECH