Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1820 ATGGATAAGGCTCGAGAGACGTGGCGCGAGTTCTTTCACTTGCCTATGGAGATTAAACAGCAATACGCTAACTCGCCCAAGACTTATGAGGGATATGGAGCAGGCTCGGAGGTTGAAAAAGGCGCTACTGACTGGAGCGATTACTATTTCCTTCACTACCTTCCCTTGTCGGTCAAAGACTACGACAAATGGCCTGCTCTGCCTGCTTCTTCCAGGGAAGTGTTTGATGAGTATGGGAGGGTGGTGAAGCTGTGCGAGAGGTTGATGAAGGTTCTGTCTGTGAACCTCGTGGACGAGGATTTTCTGCAGAATGCTTTCGGAGGACACGACGTAGGAGCGTGTCTAAGGGTCAATTTCTACCCAAAATGTCCCAAGCCGGACCTCACCCTCGCCTCTCGTCTCACTCCGATCCCGGCGGGATGGACTCTGCTGCTGCCGGACGCCGAGGTTCCCGGTCTCCAAGTTCGTAAATTCGACACCTGGATCACCGTCAAGCCCGTGCCTCATGCCTTTATTGTCAATATTGGGGACCAAATACAGGTTCTAAGCAATGCAATATACAAGAGCGTGGAACACAGAGTGATTGTGAATTCAGACAAAGAGAGACTTTCACTGGCTTTCTTCTACAACCCCAAGAGCGACATTCCCATTGCGCCGGCGAAAGAGTTGGTGACGCCGGAGCAACCGCCTCTCTATCAAGCCATGACCTTCGATGAGTACAGACTATTCATTAGGTTGATGGGACCTCGGGAATCTCATGTTGAATCCTTGAAATCACCGAGGTGA 786 0.5102 MDKARETWREFFHLPMEIKQQYANSPKTYEGYGAGSEVEKGAIXDWSDYYFLHYLPLSVKDYDKWPALPASSREVFDEYGREXVKLCERLMKVLSVNLGXDEDFLQNAFGGHDVGACLRVNFYPKCPKPDLTLASRLTPIPAGWTLLLPDAEVPGLQVRKFDTWITVKPVPHAFIVNIGDQIQVLSNAIYKSVEHRVIVNSDKERLSLAFFYNPKSDIPIAPAKELVTPEQPPLYQAMTFDEYRLFIRLMGPRXESHVESLKSPR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1820 265 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 89 214 IPR005123 -
Prci2g1820 265 Pfam 2OG-Fe(II) oxygenase superfamily 116 214 IPR044861 -
Prci2g1820 265 Pfam non-haem dioxygenase in morphine synthesis N-terminal 1 66 IPR026992 -
Prci2g1820 265 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 1 243 - -
Prci2g1820 265 SUPERFAMILY Clavaminate synthase-like 1 246 - -
Prci2g1820 265 Gene3D - 1 247 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1820 Prci-Chr2 13412239 13415467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1820 68 262 Glycosyltransferase AT5G59530 33.498 9.84e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1820 - - pcin:129301835 540.421