Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1801 ATGGCAAACTCAGACGAAGAAAATCAACTTCCGTTTCCTGCAATCCCTAAAAATGGCCCCAATACGAAGAATTTTTCCAATGACGACGATGAAGACGACGACTCCGAGGAAGTTGATGATGACGAAGACAACGACGAACGGGAGCTTCCTGCTCGAGTCCATGATGTGATAATAAGGGGCAATACGAAAACCAAGGATTGGGTGATCGAGGCTGAGGTGGAGGGGATGAAGAACGCCACGACTATGCAAGAGCTGGTAGAAGCGGCCAAAATTGCCAATGCGAAGCTTCATAGCCTCCAGATTTTTGATGCAGTCAATATTAAGCTTGAACCAGGACCACCAGAGTTGGCTAGTACTGCCAATGTCATCATTGAGGTCTCAGAGACCGACAGCAACCCTTCTGGTGAAGTCGGCATTTATTCAAAACCCTCGGTTAGTTCTTGGTCTCTCGAAGGTGCGTTAAAGTTCAAAAACTTGTTAGGCTATGGTGATCTGTGGGATGGTTCTCTAGCATATGGTCCCAATCAAACTTCAGAGGTGAGTGTTGGGGTGTTTGTGCCTCGATTGAAAGGATTATTAACCCCTGTTGTGGTACGAGCATTCATGCATTCCCAAGATTGGCAAGAGTATTCTTCATACAAAGAGAGATCGTCTGGCATGTCTCTTGGCTTATTTTCAACTAAGCACCATGACTTAGTATACAATCTTGGATGGCGTACCATAACAGATCCATCACAAATATCATCCAGATCTATTAGGAGGCAGGTTGGACATAGTTTATTGTCATCTTTGAAATATACATTTAAGATTGACCAGAGGAACTCAACAATTAGGCCTACAAGAGGATATGCTTTTCTTTCTACAACTCAATTAGGTGGCCTTGCACCAGATCACAGGAGCTTGCAGTTCCTGCGTCAGGAGTTTGATGTTCGATATGCCATTCCTTTTGGGTTTTTTCAAACAGCGCTCAACCTTGGGATCTCTGCTGGTGTCATTTTTCCATGGGGCCATGGGTTCTTGAACAAGCCTTCTCCCCTGCCAGAAAGGTTTTTCTTGGGCGGCGATTTCTCTCCAGTTTGCGCCCTAGGAGGGCCAACGACATTATGGGGATTCAGGACAAGGGCATTGGGCCCTAGTGAGCCGCGAAGACAAAGTAGAGATGGAAATAATGATGACAATGTCGATTCCTCTAGAAGGGACTTCATTGGAGGAGATCTTGCCGTTACTGCTTTTGCAGACCTCTCTTTCGATCTTCCAATCAGCTGGTTAAGAGAACATGGAATCCATGGACATGTTTTTGCTGGTGCTGGGAATATTGCCAATTTAGCTGAGAATGAATACAGGAAGTTCTCTTCTAAAAAATTTTTGGAATCATTTCGAACGTCTGTGGGATGTGGAATTGTTATTCCAACTAAAGTTTTTCGGCTGGAGGGTAATTTCTACTACATACTCAGGCAGCATGAGCATGATCGTGGAAAGACTGGTTTTAGGCTGAGTTTCTCGGTTCCTTCATAG 1515 0.4475 MANSDEENQLPFPAIPKNGPNTKNFSNDDDEDDDSEEVDDDEDNDERELPARVHDVIIRGNTKTKDWVIEAEVEGMKNATTMQELVEAAKIANAKLHSLQIFDAVNIKLEPGPPELASTANVIIEVSETDSNPSGEVGIYSKPSVSSWSLEGALKFKNLLGYGDLWDGSLAYGPNQTSEVSVGVFVPRLKGLLTPVVVRAFMHSQDWQEYSSYKERSSGMSLGLFSTKHHDLVYNLGWRTITDPSQISSRSIRRQVGHSLLSSLKYTFKIDQRNSTIRPTRGYAFLSTTQLGGLAPDHRSLQFLRQEFDVRYAIPFGFFQTALNLGISAGVIFPWGHGFLNKPSPLPERFFLGGDFSPVCALGGPTTLWGFRTRALGPSEPRRQSRDGNNDDNVDSSRRDFIGGDLAVTAFADLSFDLPISWLREHGIHGHVFAGAGNIANLAENEYRKFSSKKFLESFRTSVGCGIVIPTKVFRLEGNFYYILRQHEHDRGKTGFRLSFSVPS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1801 504 MobiDBLite consensus disorder prediction 1 53 - -
Prci2g1801 504 Pfam Surface antigen variable number repeat 52 128 IPR010827 GO:0019867
Prci2g1801 504 Gene3D membrane protein fhac 50 129 - -
Prci2g1801 504 MobiDBLite consensus disorder prediction 27 46 - -
Prci2g1801 504 Pfam Omp85 superfamily domain 158 500 IPR000184 GO:0019867
Prci2g1801 504 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 140 502 - -
Prci2g1801 504 MobiDBLite consensus disorder prediction 376 396 - -
Prci2g1801 504 MobiDBLite consensus disorder prediction 379 396 - -
Prci2g1801 504 FunFam Outer membrane OMP85 family protein 140 502 - -
Prci2g1801 504 FunFam Outer membrane OMP85 family protein 50 129 - -
Prci2g1801 504 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 35 501 IPR039910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1801 Prci-Chr2 13205516 13210213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1801 K07277 - gmx:100785408 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1801 2 13205516 13210213 Prci2g1801 2 13205516 13210213 CCT
Prci2g1801 2 13205516 13210213 Prci2g1801 2 13205516 13210213 ECH