Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1546 ATGCCGTATTGCGACGTCGGAACGAATCAAGCGACCGCCGACGACCGCCTAAACAATGAGATTAAGATATTTTATAGAACTTACGGCCATGGACCTACTAAAGTTCTCCTCATCATAGGATTGGCCGGGACACATGACTCGTGGGGCCCTCAAATCAAGGGGCTGACGGGTACCGTCTTGCCCAACGAGGATGACTCCGGCGACTCCGATTGGAATTCAGCTGATCAGCGGTGCGGAGATGACAATGAGAGTGGTGGTCGTATCGAGGTTTGCGCATTTGATAACCGTGGTATGGGTCGGAGCTCCGTACCTACCAAAAAGTCCGCCTATACAACAAAGATCATGGCAAAGGATGCAGTTGCTTTATTGGATCATTTGGGATGGAGGAAAGCCCATGTTTTTGGGCATTCAATGGGAGCTATGATAGCATGCAAGCTAGCAGCGATGGTGCCTGATAGAGTTCTCTCGTTAGCATTGCTCAATGTAACGGGGGGAGGTTTTGAATGCTTTCCAAAGTTTAATCGACAAACATTCTCCATTGCTTACCGTTTCTTAAAAGCAAAGACTCCTGAACTTAGAGCTGCTGTTGACTTGGATACCCACTACTCACAGGAATACCTTGAGGAATATGTTGGAACAGAAAAGAGGAGAACGATCTTATATCAGCGGGATCTCTTTCAGCAATACGTGAAAGGTATATCAGCTACTGGGATGCAATCAAATTATGGTTTTGAGGGCCAGGTCAATGCCTGCTGGAGACATCAAATGACTCGATCTGAGATTGAATCGATAAAATCTGCGGGTTTTCTTGTTTCAGTCATACATGGCAGGTGCAGGATATACTATGCAAGAAGATTAGCAGAGAGGCTGTACCCAATGGCTAGAATGGTAGACCTGTTTGGAGGTCATTTAGTAAGTCATGAGAGAACCGAAGAGGTCAATCAGGCACTTCTTGACTTGATCAAGGCATCAGAAGTAAAGATGAGACCAGAAGGCTGGACTAATTTGCCTAAGAAAACTGCTTGGTGGACAGAGAGAAGGACGTTAGTTTTTAGTCCAAATATTCAGGGTGGAAGCGTCTCCTTAAAGTGCTTCGTCTTAGAAAAACTGCATCTCTTTCTTATATTTCTCGTTGGTCTGCTCCTTTTGGTATTTGAGTATGGAAAAAAACTTCTAAAAAGTGTCGTAAAGCCAGTTCGAGTTGCAAGCCCCCCCTCCTATGTTGAGGGTCAATAA 1236 0.4523 MPYCDVGTNQATADDRLNNEIKIFYRTYGHGPTKVLLIIGLAGTHDSWGPQIKGLTGTVLPNEDDSGDSDWNSADQRCGDDNESGGRIEVCAFDNRGMGRSSVPTKKSAYTTKIMAKDAVALLDHLGWRKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFECFPKFNRQTFSIAYRFLKAKTPELRAAVDLDTHYSQEYLEEYVGTEKRRTILYQRDLFQQYVKGISATGMQSNYGFEGQVNACWRHQMTRSEIESIKSAGFLVSVIHGRCRIYYARRLAERLYPMARMVDLFGGHLVSHERTEEVNQALLDLIKASEVKMRPEGWTNLPKKTAWWTERRTLVFSPNIQGGSVSLKCFVLEKLHLFLIFLVGLLLLVFEYGKKLLKSVVKPVRVASPPSYVEGQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1546 411 Gene3D alpha/beta hydrolase 17 323 IPR029058 -
Prci2g1546 411 Pfam alpha/beta hydrolase fold 57 162 IPR000073 -
Prci2g1546 411 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN 10 322 - -
Prci2g1546 411 MobiDBLite consensus disorder prediction 61 83 - -
Prci2g1546 411 SUPERFAMILY alpha/beta-Hydrolases 19 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1546 Prci-Chr2 11480628 11486104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1546 90 162 Acyl Lipid Metabolism Gene Families AT3G51000 39.726 1.26e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1546 - - pvu:PHAVU_001G075000g 569.696