Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1399 ATGCCATCACAAGGTAAGGCAGAAAACAGCATTAAAATGGAAGCCGTGTTGGAGCAGCCTCAGGTGAGTTCACGGAGGCCAAAGGGTATTGCGAGCAAGATCGAGGTGCCGAGCTTCTTTCGAGAAATGGGGAAAGGGATGAAGATTGGAATGGTGAACATGGATGAAGATGATGCGGAGGAGTGGACGTCACAGGGAGAAGTAATAAATGTGTATTTCGACAGGGTATCGCAGATGTTCAACTGGACAGATTTGTTCCCCGAATGGATAGACGAGGAAGAAGAGAGCGACGTTCCATCGTGCCCGGAGATACCGATGCCGGAGTTTGAAGCATACGAGAGCATGGACGTGATCGTGGCTAAATTGCCATGCAAGCATCCGGAAGAGGGGTGGGGAAGGGACGTGTTTCGGCTACAGGTTCATCTGATAGCAGCAAAGCTGGCGGTGAAGAAAGGGAAGAAGGACTGGGATTGGAAGACCAAAGTGGTATTGTGGAGCAAGTGCAGGCCGATGATGGAGCTGTTTCCGTGTGACGATTTGGTGACGCAGGAAGGTGAGTGGTGGTATTACGAGGCAGAGGTGAAGAGGCTGCAGAACAAAATGTCGTTGCCTGTTGGATCTTGCAAGCTGGCCCTGCCCCTCTGGGAACAAGGAATAGACGAGGTGTATGACTTATCGAAGATTCAGAAAAGCGTGGCAAGCGGAACAAGAGTGAAACGCGAGGCCTACGCCACTGTGCTTCACTCTTCTGAATCCTACGTTTGTGGAGCAATAACGCTAGCACAGAGCCTCCTTCAAACCGGAACAAAACGTGACCTTATCCTCCTCATTGACAAGTCTATATCCGATCCCAAACGCCAGGCCCTCGCGGATGCGGGTTGGAAGATCCGAATCATCACCCGGATTAGGAATCCCAGGGCCGCGAATGGCACTTACAACGAGTACAACTACAGCAAATTCCGCCTCTGGCAGCTTACCGACTACGATAAGATCATATTCATCGACTCCGATATCATCGTTCTACGCAACCTCGACATCCTCTTCCACTTTCCCCAAATGTCCGCCACCGGCAACGACCAATCCATCTTCAACTCCGGCATCATGGTCATCGAACCTTCCAATTGTACCTTCCTTGTATTGATGGACCGCCGGCACGACATCGTATCCTACAATGGAGGGGACCAAGGGTTTCTGAACGAGATCTTCGTGTGGTGGCACAGATTGCCGAGGAGGGTGAATTTCCTGAAGAATTTCTGGGCGAACACGACGTTGGAAGCGAGCGTGAAGAATGGGCTGTTCGGGGCAGATCCGCCGAGGCTGTACGCGATTCACTATCTAGGGTTGAAGCCGTGGCATTGTTACAGGGACTATGATTGTAACTGGGATGTGGAGGATCAACGGGTGTACGCGAGCGACGTGGCTCACCGGAGGTGGTGGAAGCTTTACGACGAAATGGATGAGAAGTTGCAGAGTTTCTGTAGATTGACGAGACGACGTCGGATGGAGTTGAACTGGGAAAGGAGGAAAGCTGGGAAGAAGGGATTGCCAGATGGGCACTGGAAAATCAATATTACAGATCCCAGACGAGCTGGCTCTCTTTTGATGGATTAG 1611 0.5133 MPSQGKAENSIKMEAVLEQPQVSSRRPKGIASKIEVPSFFREMGKGMKIGMVNMDEDDAEEWTSQGEVINVYFDRVSQMFNWTDLFPEWIDEEEESDVPSCPEIPMPEFEAYESMDVIVAKLPCKHPEEGWGRDVFRLQVHLIAAKLAVKKGKKDWDWKTKVVLWSKCRPMMELFPCDDLVTQEGEWWYYEAEVKRLQNKMSLPVGSCKLALPLWEQGIDEVYDLSKIQKSVASGTRVKREAYATVLHSSESYVCGAITLAQSLLQTGTKRDLILLIDKSISDPKRQALADAGWKIRIITRIRNPRAANGTYNEYNYSKFRLWQLTDYDKIIFIDSDIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVIEPSNCTFLVLMDRRHDIVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNGLFGADPPRLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKLYDEMDEKLQSFCRLTRRRRMELNWERRKAGKKGLPDGHWKINITDPRRAGSLLMD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1399 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 241 490 IPR029044 -
Prci2g1399 536 Pfam Glycosyl transferase family 8 246 452 IPR002495 GO:0016757
Prci2g1399 536 FunFam Hexosyltransferase 238 489 - -
Prci2g1399 536 CDD GT8_Glycogenin 241 485 - -
Prci2g1399 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 489 IPR029044 -
Prci2g1399 536 PANTHER GLYCOGENIN SUBFAMILY MEMBER 131 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1399 Prci-Chr2 10575995 10579605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1399 13 535 Glycosyltransferase AT4G33330 66.792 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1399 K20890 - gmx:100780684 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1399 2 10575995 10579605 Prci2g1399 2 10575995 10579605 ECH