Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1226 ATGGAGTCCTCTACGTCGGGTTTATTGACGGTACGAGAACGAATCCGCGGGGCATTCCTACCATACATAGCTATAATCGAGGCTTTGATATTCACTATGATCGAATGTTTCAGTTTTCGTCGATGCGTCCATAAATGTCGATTCGGGGCCAAAGATCTGGTACAGCTGGCTGGCGAAACAAGATTTACTGTTAATGAACTGGAGGCGTTGTCAGAGCTGTTTAAGAAATTAAGTAGCCTAATAATTGATGATGGTTTGATTCACAAGGAGGAGCTTCAACTGGCAATATTTCATACCCCACAAGGAGAAAATCTTTTCCTGGATCGAAAGGTATTTGATCTTTTTGACGAAAAGAGAAATGGTGTTATCGAGTTTGAGGAATTTGTCCATGCACTCAATGTTTTCCATCCTTATGCCCCGGTAGAAGAAAAAATTAATTTTGCATTTAGGCTATACGATCTGAGGCAAACTGGGTATATTGAACGAGAAGAAGTCAAGCAAATGGTTATGGCCATCTTGATGGAATCTGACACGAGTCTGCCAGATGAGTTTGTTGAAGCTATTGTTGACAAGACTTTTGCCGATGCTGATAAGGACAACGATGGTAGAATTAGTAAAGAAGAATGGACAGATTTTGGATGTCACCACTCTGTTTCCGAGTTTTATTTTCGACGCCAACGTTGA 684 0.4108 MESSTSGLLTVRERIRGAFLPYIAIIEALIFTMIECFSFRRCVHKCRFGAKDLVQLAGETRFTVNELEALSELFKKLSSLIIDDGLIHKEELQLAIFHTPQGENLFLDRKVFDLFDEKRNGVIEFEEFVHALNVFHPYAPVEEKINFAFRLYDLRQTGYIEREEVKQMVMAILMESDTSLPDEFVEAIVDKTFADADKDNDGRISKEEWTDFGCHHSVSEFYFRRQR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1226 227 PANTHER CALCINEURIN B 42 214 IPR045198 GO:0005509|GO:0019722|GO:0019900
Prci2g1226 227 ProSiteProfiles EF-hand calcium-binding domain profile. 184 219 IPR002048 GO:0005509
Prci2g1226 227 Pfam EF-hand domain pair 142 208 IPR002048 GO:0005509
Prci2g1226 227 FunFam calcineurin B-like protein 3 52 219 - -
Prci2g1226 227 PRINTS Recoverin family signature 111 132 - -
Prci2g1226 227 PRINTS Recoverin family signature 158 176 - -
Prci2g1226 227 Pfam EF hand 109 128 IPR002048 GO:0005509
Prci2g1226 227 CDD EFh 144 212 IPR002048 GO:0005509
Prci2g1226 227 CDD EFh 109 170 IPR002048 GO:0005509
Prci2g1226 227 ProSitePatterns EF-hand calcium-binding domain. 197 209 IPR018247 -
Prci2g1226 227 SMART efh_1 188 216 IPR002048 GO:0005509
Prci2g1226 227 SMART efh_1 144 172 IPR002048 GO:0005509
Prci2g1226 227 SMART efh_1 107 135 IPR002048 GO:0005509
Prci2g1226 227 SUPERFAMILY EF-hand 55 213 IPR011992 -
Prci2g1226 227 ProSiteProfiles EF-hand calcium-binding domain profile. 109 138 IPR002048 GO:0005509
Prci2g1226 227 Gene3D - 53 225 - -
Prci2g1226 227 ProSiteProfiles EF-hand calcium-binding domain profile. 140 175 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1226 Prci-Chr2 9143856 9148363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1226 3 192 EF-hand Containing Proteins AT4G33000 63.077 3.43e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1226 K06268 - qsa:O6P43_015911 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1226 2 9143856 9148363 Prci2g1226 2 9143856 9148363 ECH