Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1223 ATGGAACGTGCACGTCGGATCGCGAATAGAGCTATTCTGAGGCGCCTCATTTCACAAGCTAAGCAGTGCCGCCAGAATGAATCTTCGCTGAACTCTTCCACACCTGTATTGTACACACCTTCTAGGTATGTATCATCTCTACCTGCCTCTGCTTTCAGAGGCAGGGGATCCAAATCTGAGAACCTGCTGGGCGGGAACTCTTTGTCACGTAATGTTGGTTTTCTGGGGGTTGCCTCCCAATCTCGATCGATTTCGGTTGAGGCACTCAAACCCAGCGACACTTTTCCTCGTCGCCACAACTCTGCAACCCCTGAGGAACAGAGCAAAATGGCTCAGTCATGCGGATTCGACAATCTTGACTCGCTTATCGACGCCACCGTGCCTAAATCGATCCGGTTGAATGAAATGAAGTTTAACAAGTTTGATGAGGGGCTGACGGAGAGCCAAATGATTGAGCACATGCAGTATCTGGCGTCTAAGAACAAAGTTTTCAAGTCATTCATTGGGATGGGGTACTATAACACCTATGTTCCACCTGTGATTTTGAGGAACATAATGGAAAATCCAGCTTGGTATACCCAGTACACTCCTTACCAGGCTGAGATATCCCAAGGCCGTCTTGAATCCTTGCTTAATTTTCAGACCATGATCACTGATCTTACTGGTCTACCCATGTCCAACGCTTCATTGCTAGATGAAGGAACTGCTGCTGCCGAGGCAATGGCAATGTGTAACAACATTCAGAAGGGAAAGAAAAAGACTTTTATCATTGCCACCAACTGTCATCCTCAGACAATTGATATTTGTAAGACAAGGGCGGAAGGTTTTGATCTTAAGGTTGTTACAGCAGATCTCAAAGATATTGAGTATAAATCGGGTGATGTTTGTGGTGTGCTTGTTCAGTACCCCGGCACTGAGGGAGAGATTTTGGATTACGGAGAATTTATTAAGAAAGCTCATGCTCATGGAGTTAAGGTTGTTATGGCAACAGATCTTCTTGCTTTGACGGTGTTGAAGCCTCCCGGTGAATTGGGAGCAGATATTGTTGTTGGCTCAGCTCAAAGGTTTGGAGTTCCAATGGGTTATGGAGGTCCTCATGCGGCTTTCCTGGCCACATCCCAAGAGTACAAGAGGATGATGCCTGGAAGAATTATTGGTGTCAGTGTTGATTCTTCTGGAAAACAAGCCTTGCGTATGGCAATGCAAACCAGAGAGCAGCATATTCGTAGAGACAAAGCGACTAGCAATATATGTACTGCCCAGGCACTACTTGCAAACATGGCAGCTATGTATGCTGTTTATCATGGACCTGAAGGACTTAAAGCTATTGCCCAACGAGTTCATGGTCTCGCTGGGGTGTTTGCTCTTGGATTAAAGAAACTTGGAGCATTTGAAGTTCAGGATCTGCCCTTCTTTGACACTGTGAAGGTTAAAACTGCTAATGCCTATGCAATTTTTGATGCTGCTTACAAAAGTGAAATGAATTTACGAGTTGTTGACGGAAACACTATCACTGTTTCCTTTGATGAAACAACCACTTTGGAGGATGTTGATGAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTAAGTCTCTTCACGGCTGCTTCTCTTGCTCCAGCAGTTCAGACTGCACTTCCTTCTGGACTAACGAGGGAGAGCCCTTATTTGACGCATCCTATCTTTAACGCGTACCACACTGAGCATGAGTTGCTAAGGTATGTTCATCAGCTACAGTCAAAGGATCTCTCACTGTGCCACAGTATGATTCCACTTGGATCTTGTACAATGAAGCTGAATGCCACAACTGAAATGATGCCTGTGACATGGCCTGGCTTTACTGACATTCACCCTTTTGCACCAGCTGAACAGGCTCAAGGTTATCAGGAAATGTTCAATAATTTGGGCGATCTATTGTGTTCCATCACTGGGTTTGACTCGTTCTCTTTGCAACCTAATGCCGGTGCTGCGGGAGAATATGCTGGACTTATGGTTATTCGTGCATATCACAAAGCAAGGGGAGACCACCACCGAAATGTTTGCATCATTCCTGTCTCAGCACATGGTACAAACCCTGCCAGTGCTGCTATGTGTGGAATGAAAATTGTCCCTGTTGGAACTGATGCCCATGGAAATATCAATATTCAAGAGTTGAAAAAGGCTGCTGAAACACACAAGAATAACTTATCCGCGCTTATGGTTACATATCCTTCAACCCATGGTGTTTACGAGGAAGGTATTGATGAGATATGCAAGATAATTCATGATAATGGAGGCCAGGTGTATATGGATGGGGCTAACATGAATGCCCAGGTGGGACTCACAAGCCCTGGCTGGATTGGAGCAGATGTTTGCCATCTCAATCTTCACAAGACATTCTGCATTCCACATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACATCCTGTGGTTCGCACTGGCGGCATTCCTGCCCCTGACAAGACTCAGCCTCTTGGTACCATTTCTGCAGCACCTTGGGGCTCAGCACTCATATTGCCAATTTCTTATGCTTACATAGCCATGATGGGCTCAAAAGGACTCACTGATGCATCCAAGATAGCCATTTTGAATGCTAACTACATGGCCAAACGATTAGAGAATGATTACCCTGTTCTTTTCCGAGGAGTAAATGGAACAGTTGCTCATGAATTCATTATTGACCTGAGAGGCTTTAAGAATACTGCTGGGATAGAGCCTGAAGACGTGGCCAAGCGCCTTATGGACTATGGGTTTCATGGACCAACGATGTCATGGCCTGTGCCTGGTACTCTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTATTGTGATGCTCTTATTTCCATTCGAGAAGAAATCGGAGAGATAGAGAAAGGGAAGGCTGATATTAATAATAATGTACTCAAGGGAGCCCCTCATCCCCCTTCACTGCTAATGGGAGATGAATGGACCAAACCATACTCTCGGGAATATGCAGCATACCCAGCTCCTTGGCTCCGTGTTTCTAAGTTCTGGCCTTCCACAGGACGTGTGGACAATGTATATGGTGACCGCAACCTTATCTGCACCCTCCTCTCAGTGTCGCAGACTGCTGAGGAACAAGCTGCTGCATCTGCTTAG 3171 0.4579 MERARRIANRAILRRLISQAKQCRQNESSLNSSTPVLYTPSRYVSSLPASAFRGRGSKSENLLGGNSLSRNVGFLGVASQSRSISVEALKPSDTFPRRHNSATPEEQSKMAQSCGFDNLDSLIDATVPKSIRLNEMKFNKFDEGLTESQMIEHMQYLASKNKVFKSFIGMGYYNTYVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIATNCHPQTIDICKTRAEGFDLKVVTADLKDIEYKSGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMATDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGAFEVQDLPFFDTVKVKTANAYAIFDAAYKSEMNLRVVDGNTITVSFDETTTLEDVDELFKVFAGGKPVSLFTAASLAPAVQTALPSGLTRESPYLTHPIFNAYHTEHELLRYVHQLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPGFTDIHPFAPAEQAQGYQEMFNNLGDLLCSITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDAHGNINIQELKKAAETHKNNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVRTGGIPAPDKTQPLGTISAAPWGSALILPISYAYIAMMGSKGLTDASKIAILNANYMAKRLENDYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRYCDALISIREEIGEIEKGKADINNNVLKGAPHPPSLLMGDEWTKPYSREYAAYPAPWLRVSKFWPSTGRVDNVYGDRNLICTLLSVSQTAEEQAAASA 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1223 1056 CDD GDC-P 568 963 IPR020581 GO:0004375|GO:0006546
Prci2g1223 1056 SUPERFAMILY PLP-dependent transferases 98 524 IPR015424 -
Prci2g1223 1056 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 178 438 - -
Prci2g1223 1056 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 79 1047 IPR020581 GO:0004375|GO:0006546
Prci2g1223 1056 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 89 1047 IPR003437 GO:0004375|GO:0006544
Prci2g1223 1056 NCBIfam aminomethyl-transferring glycine dehydrogenase 98 1040 IPR003437 GO:0004375|GO:0006544
Prci2g1223 1056 CDD GDC-P 147 524 IPR020581 GO:0004375|GO:0006546
Prci2g1223 1056 FunFam Glycine cleavage system P protein 431 520 - -
Prci2g1223 1056 Pfam Glycine cleavage system P-protein 542 818 IPR020581 GO:0004375|GO:0006546
Prci2g1223 1056 Pfam Glycine cleavage system P-protein 98 524 IPR020581 GO:0004375|GO:0006546
Prci2g1223 1056 Coils Coil 715 735 - -
Prci2g1223 1056 MobiDBLite consensus disorder prediction 91 110 - -
Prci2g1223 1056 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 607 846 - -
Prci2g1223 1056 SUPERFAMILY PLP-dependent transferases 566 1041 IPR015424 -
Prci2g1223 1056 Gene3D Aspartate Aminotransferase, domain 1 167 520 IPR015422 GO:0003824
Prci2g1223 1056 Gene3D - 178 438 IPR015421 GO:0003824
Prci2g1223 1056 Gene3D - 606 859 IPR015421 GO:0003824
Prci2g1223 1056 Gene3D Aspartate Aminotransferase, domain 1 860 994 IPR015422 GO:0003824
Prci2g1223 1056 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 856 994 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1223 K00281 - qsa:O6P43_015905 1868.2