Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1214 ATGGCGGAGCCGACCAAGTACGTTTCGCGGCAAGGCCTCAGCCAACACAACAAGAGGGGAGATCTTTGGATCTCTATACAGGGCAAGATCTATGATGTCTCTCGTTGGGTTGATGACCACCCTGGCGGTGAGCTTCCATTGTTCAATCTCGCTGGCCAGGATGTTACGAACGCCTTTCTTGCTTTCCACCCGGGCTCTGCATGGCAATACCTCGACAGGTTCTTCACCGGGTATTATCTCCAGGACTACACCACATCTGATGTGTCTAAGGATTATCGGAAACTTGTGTACGAGTTCTCCAAAATGGGTTTATTTGAAAAGAAAGGGCACGGGGTGTTCTTCACTTTGTCGTTCATGGCAGTTCTGTTTTGTGTTTGTGTTTATGGTGTTTTGTGCTGTACTAGCCCATGGGTCCACTTTGGTTGCGGGGGGCTGATGGGACTCTTGTGGATTCAGAGCGGGTGGATTGGGCATGACTCTGGGCACTATCAAGTAATGACGAGTCGGGGATTCAATCGGCTCGCTCAGATCCTTACTGGGAATTGCCTTGCAGGGATCAGTATTGGGTGGTGGAAATGGAACCACAATGCTCACCACATTGCTGTTAACAATCTCGAATTCGATCCTGATCTTCAGCACATGCCCTTTTTTGTGGTGTCTTCGAAATTTTTCAACTCCCTTACTTCTTACTTTTACGGGCGGAAGATGAACTTCGATTCTGTAACCAGATTCTTGGTTAGCTATCAGCATTGGACGTTTTATCCTGTAATGTGCTTTGCAAGAGTAAACTTATTCGCCCAATCGTTCATGTTATTGTTGTCAAAGAGGAAGGTGCCCAATAGAGGTCAAGAGCTTCTGGGGCTGTTTGTTTTCTGGATTTGGTATCCCCTGCTGGTTTCCTGTTTACCCAATTGGTGTGAAAGAATATTGTTTGTCATTGTTAGTTTTTCTGTCACAGGAATACAACATGTCCAGTTCTGTTTGAATCATTTCTCTACCAGTGTCTGTGTCGGCCAACCAAACTCCAATGATTGGTTTGAAAAGCAGACCAGTGGGACGCTTGATTTAAAGTGCTCAGCTTGGATGGATTGGTTTCATGGTGGACTGCAATTTCAGGTGGCACACCATCTGTTTCCCAGGATTCCCCGGTGCCATCTGAGGAAAATCTCGCCTTTGGTTATAGAGCTATGCAGAAAACATGATTTGCCTTACAATTGCGTGTCATTCTGGAAAGCCAATGCACTGACATTTCAGACACTCCGCGATGCAGCCTTGCAAGCCCGCGATCTCTCAAATCCCATGCCCAAAAATTTAGTTTGGGAAGCCGTCAACACTCACGGATAA 1344 0.4658 MAEPTKYVSRQGLSQHNKRGDLWISIQGKIYDVSRWVDDHPGGELPLFNLAGQDVTNAFLAFHPGSAWQYLDRFFTGYYLQDYTTSDVSKDYRKLVYEFSKMGLFEKKGHGVFFTLSFMAVLFCVCVYGVLCCTSPWVHFGCGGLMGLLWIQSGWIGHDSGHYQVMTSRGFNRLAQILTGNCLAGISIGWWKWNHNAHHIAVNNLEFDPDLQHMPFFVVSSKFFNSLTSYFYGRKMNFDSVTRFLVSYQHWTFYPVMCFARVNLFAQSFMLLLSKRKVPNRGQELLGLFVFWIWYPLLVSCLPNWCERILFVIVSFSVTGIQHVQFCLNHFSTSVCVGQPNSNDWFEKQTSGTLDLKCSAWMDWFHGGLQFQVAHHLFPRIPRCHLRKISPLVIELCRKHDLPYNCVSFWKANALTFQTLRDAALQARDLSNPMPKNLVWEAVNTHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1214 447 SMART Cyt_b5_2 8 80 IPR001199 -
Prci2g1214 447 Pfam Fatty acid desaturase 137 406 IPR005804 GO:0006629
Prci2g1214 447 CDD Delta6-FADS-like 140 402 - -
Prci2g1214 447 Gene3D - 1 86 IPR036400 -
Prci2g1214 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 82 IPR036400 -
Prci2g1214 447 PIRSF FA_sphingolip_des 1 435 IPR012171 GO:0016491
Prci2g1214 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
Prci2g1214 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 79 IPR001199 -
Prci2g1214 447 PANTHER FATTY ACID DESATURASE 2 5 429 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1214 Prci-Chr2 9060439 9065432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1214 1 447 Lipid Metabolism Gene Families AT2G46210 63.697 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1214 K21737 - tcc:18588068 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1214 2 9060439 9065432 Prci2g1214 2 9060439 9065432 ECH