LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g1159	ATGATAGCCTACCTGGAGCACTTCGTTCACGGAACTGACAAAGAATCGAGGCCCGACGATGACTTCGTCGGCCTCTCCCAAGCGCTTGACCTCCAAGGCACCATCCCCTGTGCACCCAACGGCATGGCCAGTAAAGATTTCGGAGGCTTGCAGTCCGTGAAGCCCTTGGCCCTCATCAGACCCGCCGCCGCCGACGACATCTCTCGGGTCGTCAAAGCAGCGGCTCGGTCGTCGAATCTGACGATTGCTGCGCGGGGCAACGGGCACTCGATAAACGGCCAGGCTATGGCCGATCAAGGCATCGTCCTGGACATGCGCAGCATGGAGGAGAATTTTCGCGTGATGTGGATTAATGGCTTGGCCTACGTCGACGTCTCGGGAGGGGCATTATGGGAAGACGTCCTGAAATGGTGCGTACCGGAGCTTGGCTTGGCCCCAAGGTCGTGGACGGATTATCTGGGGTTAACGGTTGGGGGAACGCTTTCTAATGCCGGGGTCAGCGGTCAAACCTTCCGTTACGGTCCTCAAACTTCGAACGTAACGGAATTGGAGGTTGTAACTGGAAAAGGCGATACGTTGGTGTGCTCCGAAACCGAAAATTCGGAACTTTTCTTTGCGGCGTTGGGTGGTCTGGGTCAGTTCGGCATCATCACCAGGGCCAGGGTTGTGCTTCAACAAGCACCAGATATGGTGAGATGGATAAGGCTAGTCTACTCTGAATTTGAAGACTTCACTAGAGATGCCGAGTCACTGGTAACTCGTCAAGAAGACGACCCTTTCGATTACGTGGAAGGGTTCGTATTTGTGAACGGAGACGACCCTTCCAGCGGGTGGCCCACAGTACCATTGGACCCGGACCAAGAATTCAACCCGAACCACATCCCTCCCACCGCTGGCCCCGTCCTTTACTGCCTCGAGCTCGCTCTTCATTATCGTAATTCAGACCGCCCTACAGATGTCGATGCGGGTGTGGATAGATCACTTCGACGGCTGCGATTCCTCCGGCCTTTCAAGTTCCAGGTGGACGTGGGCTACACCGAGTTCTTGCTACGTGTTAAGCGTGCGGAGGAAGATGCTAAGGCCAACGGCATCTGGGACGCCCCTCACCCCTGGCTCAACCTCTTCGTATCTAGCCACAACATCGTTGATTTTGATCGTGTGGTCTTCAAGGGCGTCCTCAGTCAAGGAGTGGGTGGACCCATCCTGGTCTACCCTCTCTTGCGAAGCAAGTGGGATTCTCGCACGTCGGTGGCGTTGCCGGAGAGCGACATCTTCTACATTGTGGCGCTGCTCCGATTTAACCCGCCGCCGCCGAAAGGGCCGGCCCCGGAGTTGCTGGTGGCTCAAAACCAAGAGATCATTCAGTTCTGCTGCAGCAGAGGGTTTGATTTCAAGCCATACCTTCCGCACTACAAGTGTCAGGAGGATTGGAAGCGACATTTTGGGAATCAATGGACCAGATTCGTGAGCAGAAAGACCTGTTTTGATCCCTTGTTTATCCTCGCACCTGGACAGAAAATATTCTCCAGAAACCCCCAACCTTAG	1545	0.5515	MIAYLEHFVHGTDKESRPDDDFVGLSQALDLQGTIPCAPNGMASKDFGGLQSVKPLALIRPAAADDISRVVKAAARSSNLTIAARGNGHSINGQAMADQGIVLDMRSMEENFRVMWINGLAYVDVSGGALWEDVLKWCVPELGLAPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTSNVTELEVVTGKGDTLVCSETENSELFFAALGGLGQFGIITRARVVLQQAPDMVRWIRLVYSEFEDFTRDAESLVTRQEDDPFDYVEGFVFVNGDDPSSGWPTVPLDPDQEFNPNHIPPTAGPVLYCLELALHYRNSDRPTDVDAGVDRSLRRLRFLRPFKFQVDVGYTEFLLRVKRAEEDAKANGIWDAPHPWLNLFVSSHNIVDFDRVVFKGVLSQGVGGPILVYPLLRSKWDSRTSVALPESDIFYIVALLRFNPPPPKGPAPELLVAQNQEIIQFCCSRGFDFKPYLPHYKCQEDWKRHFGNQWTRFVSRKTCFDPLFILAPGQKIFSRNPQP	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g1159	514	Pfam	Cytokinin dehydrogenase 1, FAD and cytokinin binding	228	508	IPR015345	GO:0009690\|GO:0019139\|GO:0050660
	Prci2g1159	514	Gene3D	-	43	509	IPR016167	-
	Prci2g1159	514	ProSiteProfiles	PCMH-type FAD-binding domain profile.	51	227	IPR016166	GO:0071949
	Prci2g1159	514	SUPERFAMILY	FAD-linked oxidases, C-terminal domain	228	508	IPR016164	GO:0003824\|GO:0050660
	Prci2g1159	514	Gene3D	-	105	229	IPR016169	-
	Prci2g1159	514	SUPERFAMILY	FAD-binding/transporter-associated domain-like	43	224	IPR036318	GO:0050660
	Prci2g1159	514	Gene3D	-	231	467	IPR016170	-
	Prci2g1159	514	PANTHER	GULONOLACTONE OXIDASE	18	509	-	-
	Prci2g1159	514	Pfam	FAD binding domain	55	196	IPR006094	GO:0050660

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g1159	Prci-Chr2	8613081	8617742	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g1159	K00279		-	qsa:O6P43_019139	791.956